Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.96■□□□□ 0.63
SHDQ96IW2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.96■□□□□ 0.63
SHDQ96IW2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHDQ96IW2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHDQ96IW2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SHDQ96IW2 AC008556.1-201ENST00000610908 2040 ntBASIC18.95■□□□□ 0.62
SHDQ96IW2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.95■□□□□ 0.62
SHDQ96IW2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHDQ96IW2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
SHDQ96IW2 MIR564-202ENST00000385049 94 ntBASIC18.95■□□□□ 0.62
SHDQ96IW2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.95■□□□□ 0.62
SHDQ96IW2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.95■□□□□ 0.62
SHDQ96IW2 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.95■□□□□ 0.62
SHDQ96IW2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.95■□□□□ 0.62
SHDQ96IW2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.95■□□□□ 0.62
SHDQ96IW2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.95■□□□□ 0.62
SHDQ96IW2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.95■□□□□ 0.62
SHDQ96IW2 AC009065.1-201ENST00000564055 1225 ntBASIC18.95■□□□□ 0.62
SHDQ96IW2 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.95■□□□□ 0.62
SHDQ96IW2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHDQ96IW2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHDQ96IW2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
SHDQ96IW2 AL512353.2-201ENST00000448759 1962 ntBASIC18.95■□□□□ 0.62
SHDQ96IW2 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.95■□□□□ 0.62
SHDQ96IW2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHDQ96IW2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SHDQ96IW2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.94■□□□□ 0.62
SHDQ96IW2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHDQ96IW2 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHDQ96IW2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.94■□□□□ 0.62
SHDQ96IW2 AL162377.1-201ENST00000618844 1793 ntBASIC18.94■□□□□ 0.62
SHDQ96IW2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SHDQ96IW2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHDQ96IW2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
SHDQ96IW2 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHDQ96IW2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHDQ96IW2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.94■□□□□ 0.62
SHDQ96IW2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHDQ96IW2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.94■□□□□ 0.62
SHDQ96IW2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.94■□□□□ 0.62
SHDQ96IW2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SHDQ96IW2 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SHDQ96IW2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHDQ96IW2 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHDQ96IW2 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHDQ96IW2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHDQ96IW2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.94■□□□□ 0.62
SHDQ96IW2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHDQ96IW2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.94■□□□□ 0.62
SHDQ96IW2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHDQ96IW2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHDQ96IW2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHDQ96IW2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHDQ96IW2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHDQ96IW2 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHDQ96IW2 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SHDQ96IW2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHDQ96IW2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHDQ96IW2 AC073314.1-201ENST00000568729 2216 ntBASIC18.93■□□□□ 0.62
SHDQ96IW2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.93■□□□□ 0.62
SHDQ96IW2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHDQ96IW2 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
SHDQ96IW2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHDQ96IW2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHDQ96IW2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.93■□□□□ 0.62
SHDQ96IW2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHDQ96IW2 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.93■□□□□ 0.62
SHDQ96IW2 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SHDQ96IW2 MIR1233-2-201ENST00000408138 82 ntBASIC18.93■□□□□ 0.62
SHDQ96IW2 MIR1233-1-201ENST00000408722 82 ntBASIC18.93■□□□□ 0.62
SHDQ96IW2 AL031284.1-201ENST00000419297 478 ntBASIC18.93■□□□□ 0.62
SHDQ96IW2 KRT18P67-201ENST00000432816 1264 ntBASIC18.93■□□□□ 0.62
SHDQ96IW2 RNPS1P1-201ENST00000507437 918 ntBASIC18.93■□□□□ 0.62
SHDQ96IW2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.93■□□□□ 0.62
SHDQ96IW2 AC092865.5-201ENST00000545435 363 ntBASIC18.93■□□□□ 0.62
SHDQ96IW2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.93■□□□□ 0.62
SHDQ96IW2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHDQ96IW2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.93■□□□□ 0.62
SHDQ96IW2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHDQ96IW2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.93■□□□□ 0.62
SHDQ96IW2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHDQ96IW2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
SHDQ96IW2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHDQ96IW2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHDQ96IW2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHDQ96IW2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHDQ96IW2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SHDQ96IW2 AC034236.2-201ENST00000606662 1610 ntBASIC18.92■□□□□ 0.62
SHDQ96IW2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.92■□□□□ 0.62
SHDQ96IW2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.92■□□□□ 0.62
SHDQ96IW2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHDQ96IW2 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.92■□□□□ 0.62
SHDQ96IW2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHDQ96IW2 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.92■□□□□ 0.62
SHDQ96IW2 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHDQ96IW2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.92■□□□□ 0.62
SHDQ96IW2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.92■□□□□ 0.62
SHDQ96IW2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.92■□□□□ 0.62
SHDQ96IW2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.92■□□□□ 0.62
SHDQ96IW2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms