Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDLIM5Q96HC4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDLIM5Q96HC4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 AL023284.2-201ENST00000405850 579 ntBASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 CRYGFP-201ENST00000418459 633 ntBASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 BICD1-207ENST00000551848 1962 ntBASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PDLIM5Q96HC4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 AC135050.7-201ENST00000624508 2218 ntBASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 AC126763.1-201ENST00000552015 2118 ntBASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 AC008556.1-201ENST00000610908 2040 ntBASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 NEFHP1-201ENST00000412845 2629 ntBASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 MIR564-202ENST00000385049 94 ntBASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 AP006294.2-201ENST00000641667 209 ntBASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 AL499627.1-201ENST00000569373 2188 ntBASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM5Q96HC4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDLIM5Q96HC4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDLIM5Q96HC4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms