Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 TSPY5P-201ENST00000426936 936 ntBASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.78■□□□□ 0.6
ECHDC3Q96DC8 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 AL049597.2-201ENST00000565575 961 ntBASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 AC140113.3-201ENST00000605663 199 ntBASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 AC034236.2-201ENST00000606662 1610 ntBASIC18.77■□□□□ 0.6
ECHDC3Q96DC8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.77■□□□□ 0.59
ECHDC3Q96DC8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 Z98044.1-201ENST00000632503 1764 ntBASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 FAM8A6P-201ENST00000407496 1135 ntBASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 MIR1224-201ENST00000408193 85 ntBASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 KRT18P41-201ENST00000518924 1277 ntBASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 AC022616.7-201ENST00000525383 220 ntBASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 GCSHP2-201ENST00000560971 527 ntBASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 AC010331.1-201ENST00000611423 582 ntBASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
ECHDC3Q96DC8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
ECHDC3Q96DC8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ECHDC3Q96DC8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
ECHDC3Q96DC8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms