Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APH1AQ96BI3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APH1AQ96BI3 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
APH1AQ96BI3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.64■□□□□ 0.25
APH1AQ96BI3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.64■□□□□ 0.25
APH1AQ96BI3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APH1AQ96BI3 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
APH1AQ96BI3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
APH1AQ96BI3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
APH1AQ96BI3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APH1AQ96BI3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APH1AQ96BI3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
APH1AQ96BI3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.63■□□□□ 0.25
APH1AQ96BI3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.63■□□□□ 0.25
APH1AQ96BI3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.63■□□□□ 0.25
APH1AQ96BI3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.63■□□□□ 0.25
APH1AQ96BI3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.63■□□□□ 0.25
APH1AQ96BI3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APH1AQ96BI3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
APH1AQ96BI3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.63■□□□□ 0.25
APH1AQ96BI3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APH1AQ96BI3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.63■□□□□ 0.25
APH1AQ96BI3 KRT18P57-201ENST00000443599 1254 ntBASIC16.63■□□□□ 0.25
APH1AQ96BI3 FAM210CP-201ENST00000445714 574 ntBASIC16.63■□□□□ 0.25
APH1AQ96BI3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
APH1AQ96BI3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
APH1AQ96BI3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.63■□□□□ 0.25
APH1AQ96BI3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.63■□□□□ 0.25
APH1AQ96BI3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
APH1AQ96BI3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APH1AQ96BI3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APH1AQ96BI3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.63■□□□□ 0.25
APH1AQ96BI3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.63■□□□□ 0.25
APH1AQ96BI3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APH1AQ96BI3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APH1AQ96BI3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
APH1AQ96BI3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APH1AQ96BI3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
APH1AQ96BI3 KRT8P45-201ENST00000414328 1447 ntBASIC16.62■□□□□ 0.25
APH1AQ96BI3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
APH1AQ96BI3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APH1AQ96BI3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.62■□□□□ 0.25
APH1AQ96BI3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APH1AQ96BI3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
APH1AQ96BI3 KRT8P32-201ENST00000512863 1461 ntBASIC16.62■□□□□ 0.25
APH1AQ96BI3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APH1AQ96BI3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APH1AQ96BI3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
APH1AQ96BI3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.62■□□□□ 0.25
APH1AQ96BI3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APH1AQ96BI3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
APH1AQ96BI3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
APH1AQ96BI3 RCN1P1-201ENST00000400413 996 ntBASIC16.62■□□□□ 0.25
APH1AQ96BI3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
APH1AQ96BI3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
APH1AQ96BI3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APH1AQ96BI3 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.62■□□□□ 0.25
APH1AQ96BI3 MIR3180-5-201ENST00000583743 153 ntBASIC16.62■□□□□ 0.25
APH1AQ96BI3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APH1AQ96BI3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APH1AQ96BI3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.62■□□□□ 0.25
APH1AQ96BI3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
APH1AQ96BI3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.62■□□□□ 0.25
APH1AQ96BI3 AL109659.2-201ENST00000606809 1674 ntBASIC16.62■□□□□ 0.25
APH1AQ96BI3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.62■□□□□ 0.25
APH1AQ96BI3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APH1AQ96BI3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.62■□□□□ 0.25
APH1AQ96BI3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
APH1AQ96BI3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
APH1AQ96BI3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.61■□□□□ 0.25
APH1AQ96BI3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
APH1AQ96BI3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
APH1AQ96BI3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APH1AQ96BI3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
APH1AQ96BI3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
APH1AQ96BI3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APH1AQ96BI3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
APH1AQ96BI3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APH1AQ96BI3 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APH1AQ96BI3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APH1AQ96BI3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.61■□□□□ 0.25
APH1AQ96BI3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APH1AQ96BI3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.61■□□□□ 0.25
APH1AQ96BI3 TMPOP1-202ENST00000424642 1267 ntBASIC16.61■□□□□ 0.25
APH1AQ96BI3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.61■□□□□ 0.25
APH1AQ96BI3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.61■□□□□ 0.25
APH1AQ96BI3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.61■□□□□ 0.25
APH1AQ96BI3 CR769767.2-201ENST00000622735 460 ntBASIC16.61■□□□□ 0.25
APH1AQ96BI3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
APH1AQ96BI3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.61■□□□□ 0.25
APH1AQ96BI3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
APH1AQ96BI3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
APH1AQ96BI3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
APH1AQ96BI3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.61■□□□□ 0.25
APH1AQ96BI3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.61■□□□□ 0.25
APH1AQ96BI3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APH1AQ96BI3 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
APH1AQ96BI3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APH1AQ96BI3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APH1AQ96BI3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms