Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SH3KBP1Q96B97 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 AC092338.2-201ENST00000568827 1415 ntBASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 AC007663.1-201ENST00000438948 1240 ntBASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 AC010203.1-204ENST00000548782 407 ntBASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.59■□□□□ 0.57
SH3KBP1Q96B97 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SH3KBP1Q96B97 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SH3KBP1Q96B97 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SH3KBP1Q96B97 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
SH3KBP1Q96B97 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SH3KBP1Q96B97 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SH3KBP1Q96B97 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.58■□□□□ 0.56
SH3KBP1Q96B97 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.58■□□□□ 0.56
SH3KBP1Q96B97 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SH3KBP1Q96B97 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SH3KBP1Q96B97 BX664615.1-201ENST00000443558 458 ntBASIC18.58■□□□□ 0.56
SH3KBP1Q96B97 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.58■□□□□ 0.56
SH3KBP1Q96B97 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.58■□□□□ 0.56
SH3KBP1Q96B97 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.58■□□□□ 0.56
SH3KBP1Q96B97 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.58■□□□□ 0.56
SH3KBP1Q96B97 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.58■□□□□ 0.56
SH3KBP1Q96B97 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.58■□□□□ 0.56
SH3KBP1Q96B97 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SH3KBP1Q96B97 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.58■□□□□ 0.56
SH3KBP1Q96B97 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SH3KBP1Q96B97 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SH3KBP1Q96B97 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SH3KBP1Q96B97 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SH3KBP1Q96B97 KRT8P11-201ENST00000409686 1436 ntBASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 INGX-201ENST00000359239 846 ntBASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 TSPY21P-201ENST00000433481 731 ntBASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SH3KBP1Q96B97 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms