Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.65■□□□□ 0.58
SCAMP4Q969E2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.65■□□□□ 0.58
SCAMP4Q969E2 AL023973.1-201ENST00000624619 620 ntBASIC18.65■□□□□ 0.58
SCAMP4Q969E2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCAMP4Q969E2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCAMP4Q969E2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCAMP4Q969E2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCAMP4Q969E2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCAMP4Q969E2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCAMP4Q969E2 AC006333.2-201ENST00000607957 2099 ntBASIC18.65■□□□□ 0.58
SCAMP4Q969E2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCAMP4Q969E2 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.65■□□□□ 0.58
SCAMP4Q969E2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SCAMP4Q969E2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SCAMP4Q969E2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
SCAMP4Q969E2 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SCAMP4Q969E2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.64■□□□□ 0.58
SCAMP4Q969E2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCAMP4Q969E2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCAMP4Q969E2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCAMP4Q969E2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCAMP4Q969E2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCAMP4Q969E2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCAMP4Q969E2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCAMP4Q969E2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCAMP4Q969E2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.64■□□□□ 0.57
SCAMP4Q969E2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
SCAMP4Q969E2 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.64■□□□□ 0.57
SCAMP4Q969E2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCAMP4Q969E2 COX11P1-201ENST00000489116 835 ntBASIC18.64■□□□□ 0.57
SCAMP4Q969E2 YBX1P2-201ENST00000489612 999 ntBASIC18.64■□□□□ 0.57
SCAMP4Q969E2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
SCAMP4Q969E2 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
SCAMP4Q969E2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SCAMP4Q969E2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCAMP4Q969E2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.64■□□□□ 0.57
SCAMP4Q969E2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.64■□□□□ 0.57
SCAMP4Q969E2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SCAMP4Q969E2 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SCAMP4Q969E2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SCAMP4Q969E2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SCAMP4Q969E2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 HEIH-201ENST00000623091 1652 ntBASIC18.63■□□□□ 0.57
SCAMP4Q969E2 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 MIR1224-201ENST00000408193 85 ntBASIC18.63■□□□□ 0.57
SCAMP4Q969E2 AK4P3-201ENST00000418260 669 ntBASIC18.63■□□□□ 0.57
SCAMP4Q969E2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 DUX4L26-201ENST00000489078 1255 ntBASIC18.63■□□□□ 0.57
SCAMP4Q969E2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 AC011558.1-201ENST00000623459 338 ntBASIC18.63■□□□□ 0.57
SCAMP4Q969E2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.63■□□□□ 0.57
SCAMP4Q969E2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.62■□□□□ 0.57
SCAMP4Q969E2 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SCAMP4Q969E2 AP000974.1-201ENST00000623909 2387 ntBASIC18.62■□□□□ 0.57
SCAMP4Q969E2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCAMP4Q969E2 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.62■□□□□ 0.57
SCAMP4Q969E2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCAMP4Q969E2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCAMP4Q969E2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCAMP4Q969E2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.62■□□□□ 0.57
SCAMP4Q969E2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCAMP4Q969E2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCAMP4Q969E2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SCAMP4Q969E2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.62■□□□□ 0.57
SCAMP4Q969E2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.62■□□□□ 0.57
SCAMP4Q969E2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.62■□□□□ 0.57
SCAMP4Q969E2 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCAMP4Q969E2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.62■□□□□ 0.57
SCAMP4Q969E2 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCAMP4Q969E2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.62■□□□□ 0.57
SCAMP4Q969E2 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCAMP4Q969E2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCAMP4Q969E2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCAMP4Q969E2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCAMP4Q969E2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms