Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP13Q92995 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP13Q92995 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
USP13Q92995 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.65■□□□□ 0.74
USP13Q92995 AC098818.2-201ENST00000564925 2320 ntBASIC19.65■□□□□ 0.74
USP13Q92995 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.65■□□□□ 0.74
USP13Q92995 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.65■□□□□ 0.74
USP13Q92995 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
USP13Q92995 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
USP13Q92995 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.65■□□□□ 0.74
USP13Q92995 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP13Q92995 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.65■□□□□ 0.74
USP13Q92995 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.65■□□□□ 0.74
USP13Q92995 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP13Q92995 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.65■□□□□ 0.74
USP13Q92995 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP13Q92995 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.65■□□□□ 0.74
USP13Q92995 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
USP13Q92995 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.65■□□□□ 0.74
USP13Q92995 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.65■□□□□ 0.74
USP13Q92995 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.65■□□□□ 0.74
USP13Q92995 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.65■□□□□ 0.74
USP13Q92995 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.65■□□□□ 0.74
USP13Q92995 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
USP13Q92995 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP13Q92995 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP13Q92995 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP13Q92995 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP13Q92995 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP13Q92995 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
USP13Q92995 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
USP13Q92995 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.64■□□□□ 0.74
USP13Q92995 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP13Q92995 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP13Q92995 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP13Q92995 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
USP13Q92995 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.64■□□□□ 0.74
USP13Q92995 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP13Q92995 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP13Q92995 SPDYE15P-201ENST00000424157 909 ntBASIC19.64■□□□□ 0.73
USP13Q92995 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
USP13Q92995 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.64■□□□□ 0.73
USP13Q92995 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.64■□□□□ 0.73
USP13Q92995 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.64■□□□□ 0.73
USP13Q92995 AC083849.1-201ENST00000615227 514 ntBASIC19.64■□□□□ 0.73
USP13Q92995 AC116407.4-201ENST00000623319 1061 ntBASIC19.64■□□□□ 0.73
USP13Q92995 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.64■□□□□ 0.73
USP13Q92995 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP13Q92995 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP13Q92995 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP13Q92995 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP13Q92995 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.64■□□□□ 0.73
USP13Q92995 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.64■□□□□ 0.73
USP13Q92995 AC018445.3-201ENST00000624177 1945 ntBASIC19.64■□□□□ 0.73
USP13Q92995 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP13Q92995 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP13Q92995 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.64■□□□□ 0.73
USP13Q92995 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP13Q92995 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP13Q92995 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
USP13Q92995 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP13Q92995 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
USP13Q92995 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
USP13Q92995 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP13Q92995 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP13Q92995 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP13Q92995 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
USP13Q92995 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.63■□□□□ 0.73
USP13Q92995 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.63■□□□□ 0.73
USP13Q92995 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.63■□□□□ 0.73
USP13Q92995 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP13Q92995 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP13Q92995 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.63■□□□□ 0.73
USP13Q92995 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.63■□□□□ 0.73
USP13Q92995 AL136038.3-201ENST00000561909 1096 ntBASIC19.63■□□□□ 0.73
USP13Q92995 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.63■□□□□ 0.73
USP13Q92995 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.63■□□□□ 0.73
USP13Q92995 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
USP13Q92995 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP13Q92995 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
USP13Q92995 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.63■□□□□ 0.73
USP13Q92995 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP13Q92995 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.63■□□□□ 0.73
USP13Q92995 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.63■□□□□ 0.73
USP13Q92995 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP13Q92995 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP13Q92995 TREX1-205ENST00000625293 1783 ntBASIC19.62■□□□□ 0.73
USP13Q92995 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
USP13Q92995 AL158211.5-201ENST00000623583 2518 ntBASIC19.62■□□□□ 0.73
USP13Q92995 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP13Q92995 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.62■□□□□ 0.73
USP13Q92995 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP13Q92995 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP13Q92995 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP13Q92995 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP13Q92995 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP13Q92995 AL023284.2-201ENST00000405850 579 ntBASIC19.62■□□□□ 0.73
USP13Q92995 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
USP13Q92995 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
USP13Q92995 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms