Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.95■□□□□ 0.3
PHF3Q92576 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHF3Q92576 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHF3Q92576 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHF3Q92576 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.95■□□□□ 0.3
PHF3Q92576 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PHF3Q92576 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHF3Q92576 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.95■□□□□ 0.3
PHF3Q92576 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PHF3Q92576 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHF3Q92576 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.94■□□□□ 0.3
PHF3Q92576 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PHF3Q92576 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
PHF3Q92576 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.94■□□□□ 0.3
PHF3Q92576 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.94■□□□□ 0.3
PHF3Q92576 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
PHF3Q92576 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
PHF3Q92576 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHF3Q92576 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHF3Q92576 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PHF3Q92576 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.94■□□□□ 0.3
PHF3Q92576 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.94■□□□□ 0.3
PHF3Q92576 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.94■□□□□ 0.3
PHF3Q92576 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHF3Q92576 AC006333.2-201ENST00000607957 2099 ntBASIC16.94■□□□□ 0.3
PHF3Q92576 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHF3Q92576 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHF3Q92576 HBZP1-201ENST00000354915 429 ntBASIC16.94■□□□□ 0.3
PHF3Q92576 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHF3Q92576 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PHF3Q92576 HOMER2P1-201ENST00000455653 964 ntBASIC16.94■□□□□ 0.3
PHF3Q92576 ZNF444P1-201ENST00000559497 298 ntBASIC16.94■□□□□ 0.3
PHF3Q92576 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHF3Q92576 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF3Q92576 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF3Q92576 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF3Q92576 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PHF3Q92576 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.93■□□□□ 0.3
PHF3Q92576 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PHF3Q92576 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF3Q92576 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.93■□□□□ 0.3
PHF3Q92576 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PHF3Q92576 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF3Q92576 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.93■□□□□ 0.3
PHF3Q92576 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PHF3Q92576 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.93■□□□□ 0.3
PHF3Q92576 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF3Q92576 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
PHF3Q92576 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
PHF3Q92576 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.93■□□□□ 0.3
PHF3Q92576 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF3Q92576 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.93■□□□□ 0.3
PHF3Q92576 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF3Q92576 KRT18P38-201ENST00000449496 1282 ntBASIC16.93■□□□□ 0.3
PHF3Q92576 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.93■□□□□ 0.3
PHF3Q92576 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF3Q92576 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF3Q92576 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.93■□□□□ 0.3
PHF3Q92576 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF3Q92576 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF3Q92576 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.93■□□□□ 0.3
PHF3Q92576 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.93■□□□□ 0.3
PHF3Q92576 BX323043.1-201ENST00000641006 1765 ntBASIC16.93■□□□□ 0.3
PHF3Q92576 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF3Q92576 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF3Q92576 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PHF3Q92576 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
PHF3Q92576 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PHF3Q92576 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
PHF3Q92576 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF3Q92576 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PHF3Q92576 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHF3Q92576 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHF3Q92576 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.92■□□□□ 0.3
PHF3Q92576 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.92■□□□□ 0.3
PHF3Q92576 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.92■□□□□ 0.3
PHF3Q92576 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PHF3Q92576 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHF3Q92576 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHF3Q92576 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.92■□□□□ 0.3
PHF3Q92576 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.92■□□□□ 0.3
PHF3Q92576 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHF3Q92576 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHF3Q92576 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHF3Q92576 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PHF3Q92576 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PHF3Q92576 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHF3Q92576 TSPY23P-201ENST00000440136 739 ntBASIC16.92■□□□□ 0.3
PHF3Q92576 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.92■□□□□ 0.3
PHF3Q92576 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
PHF3Q92576 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHF3Q92576 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHF3Q92576 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.92■□□□□ 0.3
PHF3Q92576 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PHF3Q92576 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHF3Q92576 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.91■□□□□ 0.3
PHF3Q92576 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PHF3Q92576 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.91■□□□□ 0.3
PHF3Q92576 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.91■□□□□ 0.3
PHF3Q92576 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms