Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
AP3S1Q92572 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S1Q92572 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S1Q92572 TERF1P5-201ENST00000477545 1207 ntBASIC16.56■□□□□ 0.24
AP3S1Q92572 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.56■□□□□ 0.24
AP3S1Q92572 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.56■□□□□ 0.24
AP3S1Q92572 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC16.56■□□□□ 0.24
AP3S1Q92572 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.56■□□□□ 0.24
AP3S1Q92572 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.56■□□□□ 0.24
AP3S1Q92572 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC16.56■□□□□ 0.24
AP3S1Q92572 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S1Q92572 AC141586.5-201ENST00000624546 2050 ntBASIC16.56■□□□□ 0.24
AP3S1Q92572 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.56■□□□□ 0.24
AP3S1Q92572 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.56■□□□□ 0.24
AP3S1Q92572 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S1Q92572 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S1Q92572 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S1Q92572 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.56■□□□□ 0.24
AP3S1Q92572 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S1Q92572 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S1Q92572 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S1Q92572 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
AP3S1Q92572 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S1Q92572 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
AP3S1Q92572 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.56■□□□□ 0.24
AP3S1Q92572 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S1Q92572 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
AP3S1Q92572 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.55■□□□□ 0.24
AP3S1Q92572 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S1Q92572 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S1Q92572 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S1Q92572 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S1Q92572 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S1Q92572 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
AP3S1Q92572 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.55■□□□□ 0.24
AP3S1Q92572 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S1Q92572 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S1Q92572 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S1Q92572 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S1Q92572 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
AP3S1Q92572 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.55■□□□□ 0.24
AP3S1Q92572 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC16.55■□□□□ 0.24
AP3S1Q92572 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.55■□□□□ 0.24
AP3S1Q92572 AC016405.3-201ENST00000607710 860 ntBASIC16.55■□□□□ 0.24
AP3S1Q92572 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
AP3S1Q92572 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S1Q92572 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.55■□□□□ 0.24
AP3S1Q92572 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S1Q92572 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
AP3S1Q92572 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
AP3S1Q92572 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.55■□□□□ 0.24
AP3S1Q92572 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
AP3S1Q92572 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.55■□□□□ 0.24
AP3S1Q92572 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S1Q92572 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.54■□□□□ 0.24
AP3S1Q92572 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S1Q92572 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S1Q92572 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S1Q92572 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S1Q92572 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S1Q92572 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
AP3S1Q92572 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
AP3S1Q92572 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.54■□□□□ 0.24
AP3S1Q92572 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S1Q92572 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S1Q92572 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S1Q92572 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.54■□□□□ 0.24
AP3S1Q92572 MYCNOS-205ENST00000641950 531 ntBASIC16.54■□□□□ 0.24
AP3S1Q92572 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S1Q92572 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.54■□□□□ 0.24
AP3S1Q92572 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S1Q92572 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S1Q92572 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S1Q92572 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.54■□□□□ 0.24
AP3S1Q92572 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S1Q92572 AC138028.4-201ENST00000564984 1845 ntBASIC16.54■□□□□ 0.24
AP3S1Q92572 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S1Q92572 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S1Q92572 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S1Q92572 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S1Q92572 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
AP3S1Q92572 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S1Q92572 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
AP3S1Q92572 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S1Q92572 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S1Q92572 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
AP3S1Q92572 AC124067.4-201ENST00000519691 2379 ntBASIC16.53■□□□□ 0.24
AP3S1Q92572 AC106820.2-201ENST00000563775 3264 ntBASIC16.53■□□□□ 0.24
AP3S1Q92572 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S1Q92572 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S1Q92572 NFIC-211ENST00000641145 8399 ntBASIC16.53■□□□□ 0.24
AP3S1Q92572 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S1Q92572 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S1Q92572 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S1Q92572 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S1Q92572 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S1Q92572 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
AP3S1Q92572 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S1Q92572 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP3S1Q92572 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms