Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
RAPGEF4Q8WZA2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAPGEF4Q8WZA2 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAPGEF4Q8WZA2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC24.61■■□□□ 1.53
RAPGEF4Q8WZA2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAPGEF4Q8WZA2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC24.61■■□□□ 1.53
RAPGEF4Q8WZA2 LINC01711-201ENST00000598340 967 ntBASIC24.61■■□□□ 1.53
RAPGEF4Q8WZA2 AL031008.1-201ENST00000619963 541 ntBASIC24.61■■□□□ 1.53
RAPGEF4Q8WZA2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC24.61■■□□□ 1.53
RAPGEF4Q8WZA2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAPGEF4Q8WZA2 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAPGEF4Q8WZA2 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAPGEF4Q8WZA2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC24.61■■□□□ 1.53
RAPGEF4Q8WZA2 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RAPGEF4Q8WZA2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF4Q8WZA2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF4Q8WZA2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
RAPGEF4Q8WZA2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF4Q8WZA2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF4Q8WZA2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF4Q8WZA2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF4Q8WZA2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF4Q8WZA2 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF4Q8WZA2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF4Q8WZA2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
RAPGEF4Q8WZA2 AC009078.2-202ENST00000463353 338 ntBASIC24.6■■□□□ 1.53
RAPGEF4Q8WZA2 AC104819.1-201ENST00000504587 486 ntBASIC24.6■■□□□ 1.53
RAPGEF4Q8WZA2 KRT18P31-201ENST00000506277 1292 ntBASIC24.6■■□□□ 1.53
RAPGEF4Q8WZA2 MIR3180-4-201ENST00000582223 153 ntBASIC24.6■■□□□ 1.53
RAPGEF4Q8WZA2 IGHV3-41-201ENST00000613121 348 ntBASIC24.6■■□□□ 1.53
RAPGEF4Q8WZA2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF4Q8WZA2 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF4Q8WZA2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC24.6■■□□□ 1.53
RAPGEF4Q8WZA2 AC006333.2-201ENST00000607957 2099 ntBASIC24.6■■□□□ 1.53
RAPGEF4Q8WZA2 AIRN-201ENST00000601203 4374 ntBASIC24.6■■□□□ 1.53
RAPGEF4Q8WZA2 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
RAPGEF4Q8WZA2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC24.6■■□□□ 1.53
RAPGEF4Q8WZA2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RAPGEF4Q8WZA2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC24.59■■□□□ 1.53
RAPGEF4Q8WZA2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC24.59■■□□□ 1.53
RAPGEF4Q8WZA2 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RAPGEF4Q8WZA2 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC24.59■■□□□ 1.53
RAPGEF4Q8WZA2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC24.59■■□□□ 1.53
RAPGEF4Q8WZA2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC24.59■■□□□ 1.53
RAPGEF4Q8WZA2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC24.59■■□□□ 1.53
RAPGEF4Q8WZA2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC24.59■■□□□ 1.53
RAPGEF4Q8WZA2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC24.59■■□□□ 1.53
RAPGEF4Q8WZA2 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RAPGEF4Q8WZA2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RAPGEF4Q8WZA2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC24.59■■□□□ 1.53
RAPGEF4Q8WZA2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RAPGEF4Q8WZA2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RAPGEF4Q8WZA2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RAPGEF4Q8WZA2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
RAPGEF4Q8WZA2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RAPGEF4Q8WZA2 IRX1P1-201ENST00000438849 1838 ntBASIC24.58■■□□□ 1.53
RAPGEF4Q8WZA2 UBQLN4P1-201ENST00000461599 1801 ntBASIC24.58■■□□□ 1.53
RAPGEF4Q8WZA2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC24.58■■□□□ 1.53
RAPGEF4Q8WZA2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC24.58■■□□□ 1.53
RAPGEF4Q8WZA2 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC24.58■■□□□ 1.53
RAPGEF4Q8WZA2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC24.58■■□□□ 1.53
RAPGEF4Q8WZA2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RAPGEF4Q8WZA2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RAPGEF4Q8WZA2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RAPGEF4Q8WZA2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
RAPGEF4Q8WZA2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC24.58■■□□□ 1.53
RAPGEF4Q8WZA2 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RAPGEF4Q8WZA2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RAPGEF4Q8WZA2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
RAPGEF4Q8WZA2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
RAPGEF4Q8WZA2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
RAPGEF4Q8WZA2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC24.58■■□□□ 1.52
RAPGEF4Q8WZA2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
RAPGEF4Q8WZA2 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
RAPGEF4Q8WZA2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
RAPGEF4Q8WZA2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 AP000347.1-202ENST00000435868 847 ntBASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 GPR32P1-201ENST00000601788 811 ntBASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 AC104692.2-201ENST00000603054 253 ntBASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 AC125437.2-201ENST00000625180 2167 ntBASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RAPGEF4Q8WZA2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms