Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
COPS9Q8WXC6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC12.71□□□□□ -0.37
COPS9Q8WXC6 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COPS9Q8WXC6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
COPS9Q8WXC6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COPS9Q8WXC6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC12.71□□□□□ -0.37
COPS9Q8WXC6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC12.71□□□□□ -0.37
COPS9Q8WXC6 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC12.71□□□□□ -0.37
COPS9Q8WXC6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC12.71□□□□□ -0.37
COPS9Q8WXC6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC12.71□□□□□ -0.37
COPS9Q8WXC6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
COPS9Q8WXC6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
COPS9Q8WXC6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
COPS9Q8WXC6 AC141586.5-201ENST00000624546 2050 ntBASIC12.71□□□□□ -0.38
COPS9Q8WXC6 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
COPS9Q8WXC6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
COPS9Q8WXC6 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
COPS9Q8WXC6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
COPS9Q8WXC6 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
COPS9Q8WXC6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
COPS9Q8WXC6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.38
COPS9Q8WXC6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
COPS9Q8WXC6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
COPS9Q8WXC6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 TSPY26P-201ENST00000476365 1326 ntBASIC12.7□□□□□ -0.38
COPS9Q8WXC6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 MIR572-201ENST00000384983 95 ntBASIC12.7□□□□□ -0.38
COPS9Q8WXC6 GRAMD4P2-201ENST00000423297 1097 ntBASIC12.7□□□□□ -0.38
COPS9Q8WXC6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 AC009299.2-201ENST00000482477 511 ntBASIC12.7□□□□□ -0.38
COPS9Q8WXC6 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 RBM17P2-201ENST00000616397 1405 ntBASIC12.7□□□□□ -0.38
COPS9Q8WXC6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
COPS9Q8WXC6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 AC067852.2-201ENST00000590513 2313 ntBASIC12.69□□□□□ -0.38
COPS9Q8WXC6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC12.69□□□□□ -0.38
COPS9Q8WXC6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
COPS9Q8WXC6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms