Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
STAG1Q8WVM7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
STAG1Q8WVM7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
STAG1Q8WVM7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC22.12■■□□□ 1.13
STAG1Q8WVM7 AC093525.10-201ENST00000625130 1569 ntBASIC22.12■■□□□ 1.13
STAG1Q8WVM7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
STAG1Q8WVM7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC22.12■■□□□ 1.13
STAG1Q8WVM7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
STAG1Q8WVM7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
STAG1Q8WVM7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC22.12■■□□□ 1.13
STAG1Q8WVM7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
STAG1Q8WVM7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
STAG1Q8WVM7 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
STAG1Q8WVM7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
STAG1Q8WVM7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC22.12■■□□□ 1.13
STAG1Q8WVM7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC22.12■■□□□ 1.13
STAG1Q8WVM7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC22.12■■□□□ 1.13
STAG1Q8WVM7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC22.12■■□□□ 1.13
STAG1Q8WVM7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC22.12■■□□□ 1.13
STAG1Q8WVM7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC22.12■■□□□ 1.13
STAG1Q8WVM7 NTF6B-201ENST00000591913 560 ntBASIC22.12■■□□□ 1.13
STAG1Q8WVM7 AC139887.4-201ENST00000607877 719 ntBASIC22.12■■□□□ 1.13
STAG1Q8WVM7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC22.12■■□□□ 1.13
STAG1Q8WVM7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
STAG1Q8WVM7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
STAG1Q8WVM7 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
STAG1Q8WVM7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
STAG1Q8WVM7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
STAG1Q8WVM7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC22.11■■□□□ 1.13
STAG1Q8WVM7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
STAG1Q8WVM7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
STAG1Q8WVM7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
STAG1Q8WVM7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.11■■□□□ 1.13
STAG1Q8WVM7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC22.11■■□□□ 1.13
STAG1Q8WVM7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
STAG1Q8WVM7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
STAG1Q8WVM7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
STAG1Q8WVM7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC22.11■■□□□ 1.13
STAG1Q8WVM7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC22.11■■□□□ 1.13
STAG1Q8WVM7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC22.11■■□□□ 1.13
STAG1Q8WVM7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC22.11■■□□□ 1.13
STAG1Q8WVM7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
STAG1Q8WVM7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
STAG1Q8WVM7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC22.11■■□□□ 1.13
STAG1Q8WVM7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
STAG1Q8WVM7 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
STAG1Q8WVM7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
STAG1Q8WVM7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
STAG1Q8WVM7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
STAG1Q8WVM7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
STAG1Q8WVM7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
STAG1Q8WVM7 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
STAG1Q8WVM7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
STAG1Q8WVM7 Z98044.1-201ENST00000632503 1764 ntBASIC22.1■■□□□ 1.13
STAG1Q8WVM7 CROCCP3-202ENST00000420820 1947 ntBASIC22.1■■□□□ 1.13
STAG1Q8WVM7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC22.1■■□□□ 1.13
STAG1Q8WVM7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
STAG1Q8WVM7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
STAG1Q8WVM7 COX11P1-201ENST00000489116 835 ntBASIC22.1■■□□□ 1.13
STAG1Q8WVM7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC22.1■■□□□ 1.13
STAG1Q8WVM7 AC098818.2-201ENST00000564925 2320 ntBASIC22.1■■□□□ 1.13
STAG1Q8WVM7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
STAG1Q8WVM7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
STAG1Q8WVM7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
STAG1Q8WVM7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 AC063952.2-201ENST00000498792 1227 ntBASIC22.09■■□□□ 1.13
STAG1Q8WVM7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
STAG1Q8WVM7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
STAG1Q8WVM7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
STAG1Q8WVM7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
STAG1Q8WVM7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC22.08■■□□□ 1.13
STAG1Q8WVM7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
STAG1Q8WVM7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
STAG1Q8WVM7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms