Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC27.82■■■□□ 2.04
ARHGEF40Q8TER5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
ARHGEF40Q8TER5 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC27.82■■■□□ 2.04
ARHGEF40Q8TER5 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC27.82■■■□□ 2.04
ARHGEF40Q8TER5 AC012640.2-201ENST00000561606 901 ntBASIC27.82■■■□□ 2.04
ARHGEF40Q8TER5 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC27.82■■■□□ 2.04
ARHGEF40Q8TER5 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC27.81■■■□□ 2.04
ARHGEF40Q8TER5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
ARHGEF40Q8TER5 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
ARHGEF40Q8TER5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC27.81■■■□□ 2.04
ARHGEF40Q8TER5 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC27.81■■■□□ 2.04
ARHGEF40Q8TER5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
ARHGEF40Q8TER5 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
ARHGEF40Q8TER5 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
ARHGEF40Q8TER5 METTL21AP1-201ENST00000438852 635 ntBASIC27.81■■■□□ 2.04
ARHGEF40Q8TER5 CYMP-203ENST00000474680 1263 ntBASIC27.81■■■□□ 2.04
ARHGEF40Q8TER5 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
ARHGEF40Q8TER5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC27.81■■■□□ 2.04
ARHGEF40Q8TER5 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
ARHGEF40Q8TER5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
ARHGEF40Q8TER5 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
ARHGEF40Q8TER5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
ARHGEF40Q8TER5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
ARHGEF40Q8TER5 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
ARHGEF40Q8TER5 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC27.8■■■□□ 2.04
ARHGEF40Q8TER5 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC27.8■■■□□ 2.04
ARHGEF40Q8TER5 RFPL4AP1-201ENST00000530883 850 ntBASIC27.8■■■□□ 2.04
ARHGEF40Q8TER5 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC27.8■■■□□ 2.04
ARHGEF40Q8TER5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
ARHGEF40Q8TER5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
ARHGEF40Q8TER5 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC27.8■■■□□ 2.04
ARHGEF40Q8TER5 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC27.79■■■□□ 2.04
ARHGEF40Q8TER5 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC27.79■■■□□ 2.04
ARHGEF40Q8TER5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC27.79■■■□□ 2.04
ARHGEF40Q8TER5 RPS15-207ENST00000591032 550 ntTSL 3 BASIC27.79■■■□□ 2.04
ARHGEF40Q8TER5 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC27.79■■■□□ 2.04
ARHGEF40Q8TER5 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
ARHGEF40Q8TER5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
ARHGEF40Q8TER5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC27.79■■■□□ 2.04
ARHGEF40Q8TER5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
ARHGEF40Q8TER5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
ARHGEF40Q8TER5 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
ARHGEF40Q8TER5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
ARHGEF40Q8TER5 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC27.78■■■□□ 2.04
ARHGEF40Q8TER5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
ARHGEF40Q8TER5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC27.78■■■□□ 2.04
ARHGEF40Q8TER5 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC27.78■■■□□ 2.04
ARHGEF40Q8TER5 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC27.78■■■□□ 2.04
ARHGEF40Q8TER5 AL512353.2-201ENST00000448759 1962 ntBASIC27.78■■■□□ 2.04
ARHGEF40Q8TER5 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC27.78■■■□□ 2.04
ARHGEF40Q8TER5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC27.78■■■□□ 2.04
ARHGEF40Q8TER5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
ARHGEF40Q8TER5 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 AC132008.2-207ENST00000454517 770 ntBASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 SART3-203ENST00000546611 1184 ntBASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 AC021087.4-201ENST00000563761 564 ntBASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 DDT-206ENST00000430101 573 ntTSL 2 BASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 KRT18P3-201ENST00000451602 1288 ntBASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
ARHGEF40Q8TER5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC27.76■■■□□ 2.04
ARHGEF40Q8TER5 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
ARHGEF40Q8TER5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
ARHGEF40Q8TER5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
ARHGEF40Q8TER5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC27.76■■■□□ 2.03
ARHGEF40Q8TER5 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC27.76■■■□□ 2.03
ARHGEF40Q8TER5 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC27.76■■■□□ 2.03
ARHGEF40Q8TER5 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
ARHGEF40Q8TER5 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
ARHGEF40Q8TER5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
ARHGEF40Q8TER5 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC27.76■■■□□ 2.03
ARHGEF40Q8TER5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
ARHGEF40Q8TER5 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC27.76■■■□□ 2.03
ARHGEF40Q8TER5 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC27.76■■■□□ 2.03
ARHGEF40Q8TER5 COA5-202ENST00000409997 557 ntTSL 4 BASIC27.76■■■□□ 2.03
ARHGEF40Q8TER5 AC002347.1-201ENST00000569543 541 ntBASIC27.76■■■□□ 2.03
ARHGEF40Q8TER5 PNMT-203ENST00000581428 677 ntTSL 2 BASIC27.76■■■□□ 2.03
ARHGEF40Q8TER5 MTDHP3-201ENST00000594186 672 ntBASIC27.76■■■□□ 2.03
ARHGEF40Q8TER5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
ARHGEF40Q8TER5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
ARHGEF40Q8TER5 AC079834.2-201ENST00000609776 1949 ntBASIC27.75■■■□□ 2.03
ARHGEF40Q8TER5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
ARHGEF40Q8TER5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms