Protein–RNA interactions for Protein: Q8NCT1

ARRDC4, Arrestin domain-containing protein 4, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC4Q8NCT1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARRDC4Q8NCT1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ARRDC4Q8NCT1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.92■□□□□ 0.94
ARRDC4Q8NCT1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARRDC4Q8NCT1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ARRDC4Q8NCT1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ARRDC4Q8NCT1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.92■□□□□ 0.94
ARRDC4Q8NCT1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ARRDC4Q8NCT1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
ARRDC4Q8NCT1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ARRDC4Q8NCT1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.91■□□□□ 0.94
ARRDC4Q8NCT1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.91■□□□□ 0.94
ARRDC4Q8NCT1 AL590627.1-203ENST00000421194 1026 ntBASIC20.91■□□□□ 0.94
ARRDC4Q8NCT1 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.91■□□□□ 0.94
ARRDC4Q8NCT1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.91■□□□□ 0.94
ARRDC4Q8NCT1 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.91■□□□□ 0.94
ARRDC4Q8NCT1 HOXB1-202ENST00000577092 1414 ntBASIC20.91■□□□□ 0.94
ARRDC4Q8NCT1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ARRDC4Q8NCT1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ARRDC4Q8NCT1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ARRDC4Q8NCT1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ARRDC4Q8NCT1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 AL109659.2-201ENST00000606809 1674 ntBASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ARRDC4Q8NCT1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.89■□□□□ 0.94
ARRDC4Q8NCT1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
ARRDC4Q8NCT1 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.89■□□□□ 0.93
ARRDC4Q8NCT1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ARRDC4Q8NCT1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ARRDC4Q8NCT1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ARRDC4Q8NCT1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.89■□□□□ 0.93
ARRDC4Q8NCT1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.89■□□□□ 0.93
ARRDC4Q8NCT1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ARRDC4Q8NCT1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.89■□□□□ 0.93
ARRDC4Q8NCT1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ARRDC4Q8NCT1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.89■□□□□ 0.93
ARRDC4Q8NCT1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ARRDC4Q8NCT1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ARRDC4Q8NCT1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ARRDC4Q8NCT1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.89■□□□□ 0.93
ARRDC4Q8NCT1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.89■□□□□ 0.93
ARRDC4Q8NCT1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.89■□□□□ 0.93
ARRDC4Q8NCT1 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 IGHV3-47-201ENST00000425060 335 ntBASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 PMS2P1-201ENST00000431037 1228 ntBASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 GUSBP12-201ENST00000513727 720 ntBASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 GPR32P1-201ENST00000601788 811 ntBASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 LINC01521-201ENST00000504184 1943 ntBASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
ARRDC4Q8NCT1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ARRDC4Q8NCT1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms