Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC89Q8N998 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC89Q8N998 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.52■□□□□ 0.72
CCDC89Q8N998 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC89Q8N998 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.52■□□□□ 0.72
CCDC89Q8N998 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC89Q8N998 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.52■□□□□ 0.72
CCDC89Q8N998 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.52■□□□□ 0.72
CCDC89Q8N998 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC89Q8N998 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CCDC89Q8N998 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC89Q8N998 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC89Q8N998 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.52■□□□□ 0.71
CCDC89Q8N998 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CCDC89Q8N998 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
CCDC89Q8N998 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CCDC89Q8N998 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
CCDC89Q8N998 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC89Q8N998 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC89Q8N998 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC89Q8N998 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC89Q8N998 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC89Q8N998 AC239809.2-201ENST00000415381 517 ntBASIC19.51■□□□□ 0.71
CCDC89Q8N998 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
CCDC89Q8N998 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC89Q8N998 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.51■□□□□ 0.71
CCDC89Q8N998 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC89Q8N998 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC89Q8N998 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CCDC89Q8N998 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.51■□□□□ 0.71
CCDC89Q8N998 AC073592.3-201ENST00000625118 1834 ntBASIC19.51■□□□□ 0.71
CCDC89Q8N998 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CCDC89Q8N998 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CCDC89Q8N998 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC89Q8N998 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC89Q8N998 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC89Q8N998 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC89Q8N998 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC89Q8N998 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC89Q8N998 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.5■□□□□ 0.71
CCDC89Q8N998 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC89Q8N998 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC89Q8N998 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC89Q8N998 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC89Q8N998 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC89Q8N998 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.5■□□□□ 0.71
CCDC89Q8N998 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC89Q8N998 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.5■□□□□ 0.71
CCDC89Q8N998 AC233263.1-201ENST00000578059 224 ntBASIC19.5■□□□□ 0.71
CCDC89Q8N998 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.5■□□□□ 0.71
CCDC89Q8N998 AL023875.1-201ENST00000640777 796 ntBASIC19.5■□□□□ 0.71
CCDC89Q8N998 AC018470.1-201ENST00000624790 3129 ntBASIC19.5■□□□□ 0.71
CCDC89Q8N998 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC89Q8N998 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC89Q8N998 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC89Q8N998 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC89Q8N998 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CCDC89Q8N998 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC89Q8N998 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CCDC89Q8N998 NOC2LP1-202ENST00000452600 2235 ntBASIC19.49■□□□□ 0.71
CCDC89Q8N998 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC89Q8N998 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC89Q8N998 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC89Q8N998 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC89Q8N998 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CCDC89Q8N998 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC89Q8N998 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC89Q8N998 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CCDC89Q8N998 KRASP1-201ENST00000407852 552 ntBASIC19.49■□□□□ 0.71
CCDC89Q8N998 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC89Q8N998 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC89Q8N998 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC89Q8N998 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.49■□□□□ 0.71
CCDC89Q8N998 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CCDC89Q8N998 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC89Q8N998 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CCDC89Q8N998 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC89Q8N998 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
CCDC89Q8N998 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
CCDC89Q8N998 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC89Q8N998 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC89Q8N998 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC89Q8N998 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
CCDC89Q8N998 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC89Q8N998 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC89Q8N998 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.49■□□□□ 0.71
CCDC89Q8N998 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC89Q8N998 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC89Q8N998 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.49■□□□□ 0.71
CCDC89Q8N998 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCDC89Q8N998 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC89Q8N998 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC89Q8N998 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.48■□□□□ 0.71
CCDC89Q8N998 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC89Q8N998 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CCDC89Q8N998 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC89Q8N998 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCDC89Q8N998 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.48■□□□□ 0.71
CCDC89Q8N998 ID1-201ENST00000376105 1233 ntBASIC19.48■□□□□ 0.71
CCDC89Q8N998 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms