Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 AC090164.3-201ENST00000610780 2143 ntBASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 FAM207BP-201ENST00000447172 505 ntBASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 AC011506.1-201ENST00000474329 610 ntBASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LSMEM1Q8N8F7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 AC009113.1-201ENST00000570267 2443 ntBASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 MESTP1-201ENST00000404287 994 ntBASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 UBE2SP1-201ENST00000450587 669 ntBASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LSMEM1Q8N8F7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 MTMR9LP-203ENST00000426597 1545 ntBASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 AC098590.1-201ENST00000468126 897 ntBASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.18■□□□□ 0.34
LSMEM1Q8N8F7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms