Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 AL023875.1-201ENST00000640777 796 ntBASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
EFCAB3Q8N7B9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
EFCAB3Q8N7B9 TFP1-202ENST00000475455 1573 ntBASIC18.64■□□□□ 0.58
EFCAB3Q8N7B9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 AL691447.1-201ENST00000419456 387 ntBASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.64■□□□□ 0.57
EFCAB3Q8N7B9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 AC124016.1-201ENST00000609552 612 ntBASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 AC110285.5-201ENST00000611501 352 ntBASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 AP000997.3-201ENST00000623333 2250 ntBASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
EFCAB3Q8N7B9 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms