Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
AFAP1Q8N556 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
AFAP1Q8N556 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC28.1■■■□□ 2.09
AFAP1Q8N556 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC28.1■■■□□ 2.09
AFAP1Q8N556 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
AFAP1Q8N556 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
AFAP1Q8N556 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
AFAP1Q8N556 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
AFAP1Q8N556 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
AFAP1Q8N556 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
AFAP1Q8N556 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
AFAP1Q8N556 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
AFAP1Q8N556 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
AFAP1Q8N556 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC28.09■■■□□ 2.09
AFAP1Q8N556 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC28.09■■■□□ 2.09
AFAP1Q8N556 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
AFAP1Q8N556 KATNBL1P6-202ENST00000562413 1466 ntBASIC28.09■■■□□ 2.09
AFAP1Q8N556 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
AFAP1Q8N556 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC28.09■■■□□ 2.09
AFAP1Q8N556 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
AFAP1Q8N556 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
AFAP1Q8N556 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC28.09■■■□□ 2.09
AFAP1Q8N556 PPOX-214ENST00000535223 664 ntTSL 3 BASIC28.09■■■□□ 2.09
AFAP1Q8N556 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC28.09■■■□□ 2.09
AFAP1Q8N556 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC28.09■■■□□ 2.09
AFAP1Q8N556 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
AFAP1Q8N556 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
AFAP1Q8N556 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
AFAP1Q8N556 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
AFAP1Q8N556 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC28.09■■■□□ 2.09
AFAP1Q8N556 TREX1-205ENST00000625293 1783 ntBASIC28.09■■■□□ 2.09
AFAP1Q8N556 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
AFAP1Q8N556 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
AFAP1Q8N556 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC28.08■■■□□ 2.09
AFAP1Q8N556 KRT8P32-201ENST00000512863 1461 ntBASIC28.08■■■□□ 2.09
AFAP1Q8N556 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC28.08■■■□□ 2.09
AFAP1Q8N556 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
AFAP1Q8N556 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
AFAP1Q8N556 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
AFAP1Q8N556 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
AFAP1Q8N556 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC28.08■■■□□ 2.09
AFAP1Q8N556 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
AFAP1Q8N556 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC28.08■■■□□ 2.09
AFAP1Q8N556 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC28.08■■■□□ 2.09
AFAP1Q8N556 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC28.08■■■□□ 2.09
AFAP1Q8N556 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
AFAP1Q8N556 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
AFAP1Q8N556 RPL18-209ENST00000550645 463 ntTSL 5 BASIC28.08■■■□□ 2.09
AFAP1Q8N556 RPL18-214ENST00000552588 559 ntTSL 3 BASIC28.08■■■□□ 2.09
AFAP1Q8N556 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC28.08■■■□□ 2.09
AFAP1Q8N556 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC28.08■■■□□ 2.09
AFAP1Q8N556 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC28.08■■■□□ 2.09
AFAP1Q8N556 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
AFAP1Q8N556 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
AFAP1Q8N556 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
AFAP1Q8N556 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
AFAP1Q8N556 MIR1233-2-201ENST00000408138 82 ntBASIC28.07■■■□□ 2.08
AFAP1Q8N556 MIR1233-1-201ENST00000408722 82 ntBASIC28.07■■■□□ 2.08
AFAP1Q8N556 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC28.07■■■□□ 2.08
AFAP1Q8N556 MINOS1P3-201ENST00000457048 203 ntBASIC28.07■■■□□ 2.08
AFAP1Q8N556 RNPS1P1-201ENST00000507437 918 ntBASIC28.07■■■□□ 2.08
AFAP1Q8N556 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
AFAP1Q8N556 MIR5100-201ENST00000579544 119 ntBASIC28.07■■■□□ 2.08
AFAP1Q8N556 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC28.07■■■□□ 2.08
AFAP1Q8N556 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
AFAP1Q8N556 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC28.06■■■□□ 2.08
AFAP1Q8N556 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC28.06■■■□□ 2.08
AFAP1Q8N556 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC28.06■■■□□ 2.08
AFAP1Q8N556 FABP5-202ENST00000396359 986 ntTSL 5 BASIC28.06■■■□□ 2.08
AFAP1Q8N556 POM121L3P-201ENST00000419331 1163 ntBASIC28.06■■■□□ 2.08
AFAP1Q8N556 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
AFAP1Q8N556 AC018712.1-201ENST00000455767 687 ntBASIC28.06■■■□□ 2.08
AFAP1Q8N556 VENTXP7-201ENST00000475503 772 ntBASIC28.06■■■□□ 2.08
AFAP1Q8N556 REEP1-209ENST00000541910 969 ntTSL 2 BASIC28.06■■■□□ 2.08
AFAP1Q8N556 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
AFAP1Q8N556 MIR7706-201ENST00000613747 67 ntBASIC28.06■■■□□ 2.08
AFAP1Q8N556 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC28.06■■■□□ 2.08
AFAP1Q8N556 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
AFAP1Q8N556 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
AFAP1Q8N556 Z82202.1-201ENST00000623446 1880 ntBASIC28.06■■■□□ 2.08
AFAP1Q8N556 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC28.06■■■□□ 2.08
AFAP1Q8N556 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
AFAP1Q8N556 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
AFAP1Q8N556 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
AFAP1Q8N556 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
AFAP1Q8N556 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
AFAP1Q8N556 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC28.05■■■□□ 2.08
AFAP1Q8N556 AC034236.2-201ENST00000606662 1610 ntBASIC28.05■■■□□ 2.08
AFAP1Q8N556 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC28.04■■■□□ 2.08
AFAP1Q8N556 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
AFAP1Q8N556 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC28.04■■■□□ 2.08
AFAP1Q8N556 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
AFAP1Q8N556 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
AFAP1Q8N556 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
AFAP1Q8N556 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
AFAP1Q8N556 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
AFAP1Q8N556 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
AFAP1Q8N556 AL591684.3-201ENST00000605187 298 ntBASIC28.04■■■□□ 2.08
AFAP1Q8N556 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC28.04■■■□□ 2.08
AFAP1Q8N556 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms