Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.68■□□□□ 0.9
NME8Q8N427 AC092597.1-201ENST00000487352 616 ntBASIC20.68■□□□□ 0.9
NME8Q8N427 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.68■□□□□ 0.9
NME8Q8N427 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.68■□□□□ 0.9
NME8Q8N427 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NME8Q8N427 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NME8Q8N427 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NME8Q8N427 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NME8Q8N427 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NME8Q8N427 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.68■□□□□ 0.9
NME8Q8N427 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.68■□□□□ 0.9
NME8Q8N427 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.68■□□□□ 0.9
NME8Q8N427 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
NME8Q8N427 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.67■□□□□ 0.9
NME8Q8N427 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
NME8Q8N427 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NME8Q8N427 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.67■□□□□ 0.9
NME8Q8N427 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NME8Q8N427 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NME8Q8N427 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NME8Q8N427 CNP-204ENST00000472031 1019 ntTSL 2 BASIC20.67■□□□□ 0.9
NME8Q8N427 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NME8Q8N427 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.67■□□□□ 0.9
NME8Q8N427 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NME8Q8N427 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
NME8Q8N427 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
NME8Q8N427 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NME8Q8N427 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NME8Q8N427 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.67■□□□□ 0.9
NME8Q8N427 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.67■□□□□ 0.9
NME8Q8N427 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.67■□□□□ 0.9
NME8Q8N427 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NME8Q8N427 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NME8Q8N427 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NME8Q8N427 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.66■□□□□ 0.9
NME8Q8N427 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NME8Q8N427 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NME8Q8N427 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.66■□□□□ 0.9
NME8Q8N427 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NME8Q8N427 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
NME8Q8N427 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NME8Q8N427 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NME8Q8N427 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NME8Q8N427 RCC2P3-201ENST00000418112 1537 ntBASIC20.66■□□□□ 0.9
NME8Q8N427 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.66■□□□□ 0.9
NME8Q8N427 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
NME8Q8N427 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NME8Q8N427 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.66■□□□□ 0.9
NME8Q8N427 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NME8Q8N427 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.66■□□□□ 0.9
NME8Q8N427 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NME8Q8N427 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NME8Q8N427 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NME8Q8N427 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.65■□□□□ 0.9
NME8Q8N427 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NME8Q8N427 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
NME8Q8N427 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.65■□□□□ 0.9
NME8Q8N427 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.65■□□□□ 0.9
NME8Q8N427 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.65■□□□□ 0.9
NME8Q8N427 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NME8Q8N427 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NME8Q8N427 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NME8Q8N427 KRT18P48-201ENST00000434763 852 ntBASIC20.65■□□□□ 0.9
NME8Q8N427 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NME8Q8N427 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.65■□□□□ 0.9
NME8Q8N427 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.65■□□□□ 0.9
NME8Q8N427 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.65■□□□□ 0.9
NME8Q8N427 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.65■□□□□ 0.9
NME8Q8N427 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
NME8Q8N427 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NME8Q8N427 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NME8Q8N427 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NME8Q8N427 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NME8Q8N427 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NME8Q8N427 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NME8Q8N427 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.64■□□□□ 0.9
NME8Q8N427 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
NME8Q8N427 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
NME8Q8N427 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
NME8Q8N427 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
NME8Q8N427 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
NME8Q8N427 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NME8Q8N427 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.64■□□□□ 0.89
NME8Q8N427 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NME8Q8N427 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.64■□□□□ 0.89
NME8Q8N427 AL645929.1-201ENST00000420084 975 ntBASIC20.64■□□□□ 0.89
NME8Q8N427 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.64■□□□□ 0.89
NME8Q8N427 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.64■□□□□ 0.89
NME8Q8N427 MIR3917-201ENST00000580971 93 ntBASIC20.64■□□□□ 0.89
NME8Q8N427 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NME8Q8N427 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NME8Q8N427 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NME8Q8N427 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NME8Q8N427 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NME8Q8N427 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NME8Q8N427 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.64■□□□□ 0.89
NME8Q8N427 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
NME8Q8N427 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
NME8Q8N427 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NME8Q8N427 KRT8P32-201ENST00000512863 1461 ntBASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms