Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.33■□□□□ 0.37
C9orf40Q8IXQ3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.33■□□□□ 0.37
C9orf40Q8IXQ3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
C9orf40Q8IXQ3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
C9orf40Q8IXQ3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
C9orf40Q8IXQ3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
C9orf40Q8IXQ3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C9orf40Q8IXQ3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
C9orf40Q8IXQ3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.36
C9orf40Q8IXQ3 MIR564-202ENST00000385049 94 ntBASIC17.33■□□□□ 0.36
C9orf40Q8IXQ3 AC117947.1-201ENST00000427448 529 ntBASIC17.33■□□□□ 0.36
C9orf40Q8IXQ3 AC104076.2-201ENST00000448912 469 ntBASIC17.33■□□□□ 0.36
C9orf40Q8IXQ3 COX11P1-201ENST00000489116 835 ntBASIC17.33■□□□□ 0.36
C9orf40Q8IXQ3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.33■□□□□ 0.36
C9orf40Q8IXQ3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.33■□□□□ 0.36
C9orf40Q8IXQ3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C9orf40Q8IXQ3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
C9orf40Q8IXQ3 AC018445.3-201ENST00000624177 1945 ntBASIC17.33■□□□□ 0.36
C9orf40Q8IXQ3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
C9orf40Q8IXQ3 AL357033.4-201ENST00000617703 1807 ntBASIC17.33■□□□□ 0.36
C9orf40Q8IXQ3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.33■□□□□ 0.36
C9orf40Q8IXQ3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 NEK4P2-201ENST00000580004 1012 ntBASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 AC139887.4-201ENST00000607877 719 ntBASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 AL023973.1-201ENST00000624619 620 ntBASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
C9orf40Q8IXQ3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 AC098818.2-201ENST00000564925 2320 ntBASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
C9orf40Q8IXQ3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 Z98044.1-201ENST00000632503 1764 ntBASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 AP000523.1-201ENST00000398242 1049 ntBASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 YBX1P2-201ENST00000489612 999 ntBASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 BX323043.1-201ENST00000641006 1765 ntBASIC17.3■□□□□ 0.36
C9orf40Q8IXQ3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms