Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 AC106730.1-201ENST00000566722 1090 ntBASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
VPS13BQ7Z7G8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
VPS13BQ7Z7G8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
VPS13BQ7Z7G8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC11.58□□□□□ -0.55
VPS13BQ7Z7G8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 MED22-202ENST00000371999 987 ntTSL 3 BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 RNPS1P1-201ENST00000507437 918 ntBASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 AC099343.3-201ENST00000605834 2503 ntBASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 RPSAP43-201ENST00000402237 625 ntBASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
VPS13BQ7Z7G8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 KRT18P58-201ENST00000527480 1120 ntBASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 KRT8P3-201ENST00000519669 1449 ntBASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 MOK-208ENST00000519058 917 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13BQ7Z7G8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms