Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAI1Q7Z5J4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RAI1Q7Z5J4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC16.02■□□□□ 0.15
RAI1Q7Z5J4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.02■□□□□ 0.15
RAI1Q7Z5J4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.02■□□□□ 0.15
RAI1Q7Z5J4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAI1Q7Z5J4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAI1Q7Z5J4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
RAI1Q7Z5J4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.02■□□□□ 0.15
RAI1Q7Z5J4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.02■□□□□ 0.15
RAI1Q7Z5J4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
RAI1Q7Z5J4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.02■□□□□ 0.15
RAI1Q7Z5J4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.02■□□□□ 0.15
RAI1Q7Z5J4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
RAI1Q7Z5J4 AC092329.2-201ENST00000598402 547 ntBASIC16.02■□□□□ 0.15
RAI1Q7Z5J4 AL136038.4-201ENST00000603606 1261 ntBASIC16.02■□□□□ 0.15
RAI1Q7Z5J4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.02■□□□□ 0.15
RAI1Q7Z5J4 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 HOXB1-202ENST00000577092 1414 ntBASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
RAI1Q7Z5J4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16■□□□□ 0.15
RAI1Q7Z5J4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
RAI1Q7Z5J4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAI1Q7Z5J4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RAI1Q7Z5J4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAI1Q7Z5J4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16■□□□□ 0.15
RAI1Q7Z5J4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16■□□□□ 0.15
RAI1Q7Z5J4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
RAI1Q7Z5J4 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16■□□□□ 0.15
RAI1Q7Z5J4 FDX1P1-201ENST00000449115 551 ntBASIC16■□□□□ 0.15
RAI1Q7Z5J4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16■□□□□ 0.15
RAI1Q7Z5J4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16■□□□□ 0.15
RAI1Q7Z5J4 KRT8P26-201ENST00000534154 1276 ntBASIC16■□□□□ 0.15
RAI1Q7Z5J4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16■□□□□ 0.15
RAI1Q7Z5J4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16■□□□□ 0.15
RAI1Q7Z5J4 AC092119.3-201ENST00000612618 583 ntBASIC16■□□□□ 0.15
RAI1Q7Z5J4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAI1Q7Z5J4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAI1Q7Z5J4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAI1Q7Z5J4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RAI1Q7Z5J4 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RAI1Q7Z5J4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAI1Q7Z5J4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16■□□□□ 0.15
RAI1Q7Z5J4 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16■□□□□ 0.15
RAI1Q7Z5J4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
RAI1Q7Z5J4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAI1Q7Z5J4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAI1Q7Z5J4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAI1Q7Z5J4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RAI1Q7Z5J4 AC005332.7-201ENST00000614046 2005 ntBASIC16■□□□□ 0.15
RAI1Q7Z5J4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16■□□□□ 0.15
RAI1Q7Z5J4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAI1Q7Z5J4 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAI1Q7Z5J4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RAI1Q7Z5J4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16■□□□□ 0.15
RAI1Q7Z5J4 DRAXINP1-201ENST00000437611 948 ntBASIC16■□□□□ 0.15
RAI1Q7Z5J4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16■□□□□ 0.15
RAI1Q7Z5J4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16■□□□□ 0.15
RAI1Q7Z5J4 RNF126P1-202ENST00000569893 925 ntBASIC16■□□□□ 0.15
RAI1Q7Z5J4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.99■□□□□ 0.15
RAI1Q7Z5J4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAI1Q7Z5J4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC15.99■□□□□ 0.15
RAI1Q7Z5J4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.99■□□□□ 0.15
RAI1Q7Z5J4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15.99■□□□□ 0.15
RAI1Q7Z5J4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAI1Q7Z5J4 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAI1Q7Z5J4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAI1Q7Z5J4 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAI1Q7Z5J4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.99■□□□□ 0.15
RAI1Q7Z5J4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.99■□□□□ 0.15
RAI1Q7Z5J4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAI1Q7Z5J4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAI1Q7Z5J4 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
RAI1Q7Z5J4 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.99■□□□□ 0.15
RAI1Q7Z5J4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.99■□□□□ 0.15
RAI1Q7Z5J4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.99■□□□□ 0.15
RAI1Q7Z5J4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAI1Q7Z5J4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAI1Q7Z5J4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms