Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.64■□□□□ 0.09
VPS13CQ709C8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.64■□□□□ 0.09
VPS13CQ709C8 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.64■□□□□ 0.09
VPS13CQ709C8 Z69720.1-201ENST00000601483 472 ntBASIC15.64■□□□□ 0.09
VPS13CQ709C8 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13CQ709C8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13CQ709C8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13CQ709C8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13CQ709C8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13CQ709C8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13CQ709C8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13CQ709C8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC15.64■□□□□ 0.09
VPS13CQ709C8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13CQ709C8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
VPS13CQ709C8 PMS2P2-201ENST00000425039 1128 ntBASIC15.64■□□□□ 0.09
VPS13CQ709C8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.64■□□□□ 0.09
VPS13CQ709C8 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.64■□□□□ 0.09
VPS13CQ709C8 AC139887.3-201ENST00000568585 713 ntBASIC15.64■□□□□ 0.09
VPS13CQ709C8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13CQ709C8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC15.64■□□□□ 0.09
VPS13CQ709C8 ZNF815P-204ENST00000434898 1737 ntBASIC15.64■□□□□ 0.09
VPS13CQ709C8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC15.64■□□□□ 0.09
VPS13CQ709C8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13CQ709C8 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13CQ709C8 AC079834.2-201ENST00000609776 1949 ntBASIC15.64■□□□□ 0.09
VPS13CQ709C8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
VPS13CQ709C8 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.63■□□□□ 0.09
VPS13CQ709C8 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
VPS13CQ709C8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS13CQ709C8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS13CQ709C8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
VPS13CQ709C8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS13CQ709C8 MIR940-201ENST00000401276 94 ntBASIC15.63■□□□□ 0.09
VPS13CQ709C8 AL023284.2-201ENST00000405850 579 ntBASIC15.63■□□□□ 0.09
VPS13CQ709C8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.63■□□□□ 0.09
VPS13CQ709C8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.63■□□□□ 0.09
VPS13CQ709C8 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.63■□□□□ 0.09
VPS13CQ709C8 AC064862.7-201ENST00000604520 867 ntBASIC15.63■□□□□ 0.09
VPS13CQ709C8 MIR7706-201ENST00000613747 67 ntBASIC15.63■□□□□ 0.09
VPS13CQ709C8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS13CQ709C8 AC007952.6-201ENST00000573168 2673 ntBASIC15.63■□□□□ 0.09
VPS13CQ709C8 AC003957.1-201ENST00000625108 2673 ntBASIC15.63■□□□□ 0.09
VPS13CQ709C8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.63■□□□□ 0.09
VPS13CQ709C8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS13CQ709C8 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS13CQ709C8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS13CQ709C8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.63■□□□□ 0.09
VPS13CQ709C8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VPS13CQ709C8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VPS13CQ709C8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS13CQ709C8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.63■□□□□ 0.09
VPS13CQ709C8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.63■□□□□ 0.09
VPS13CQ709C8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.63■□□□□ 0.09
VPS13CQ709C8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.63■□□□□ 0.09
VPS13CQ709C8 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VPS13CQ709C8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS13CQ709C8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS13CQ709C8 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.62■□□□□ 0.09
VPS13CQ709C8 NSUN5P1-202ENST00000421140 1535 ntBASIC15.62■□□□□ 0.09
VPS13CQ709C8 NSUN5P2-203ENST00000457352 1529 ntBASIC15.62■□□□□ 0.09
VPS13CQ709C8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13CQ709C8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
VPS13CQ709C8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.62■□□□□ 0.09
VPS13CQ709C8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13CQ709C8 AC233702.3-201ENST00000578656 1387 ntBASIC15.62■□□□□ 0.09
VPS13CQ709C8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13CQ709C8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13CQ709C8 AC148477.8-201ENST00000624298 468 ntBASIC15.62■□□□□ 0.09
VPS13CQ709C8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.62■□□□□ 0.09
VPS13CQ709C8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13CQ709C8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13CQ709C8 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
VPS13CQ709C8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.62■□□□□ 0.09
VPS13CQ709C8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.62■□□□□ 0.09
VPS13CQ709C8 AC009237.14-201ENST00000609975 1594 ntBASIC15.62■□□□□ 0.09
VPS13CQ709C8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13CQ709C8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
VPS13CQ709C8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13CQ709C8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13CQ709C8 RPL13AP23-201ENST00000480739 586 ntBASIC15.62■□□□□ 0.09
VPS13CQ709C8 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.62■□□□□ 0.09
VPS13CQ709C8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13CQ709C8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.62■□□□□ 0.09
VPS13CQ709C8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.62■□□□□ 0.09
VPS13CQ709C8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.62■□□□□ 0.09
VPS13CQ709C8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13CQ709C8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.62■□□□□ 0.09
VPS13CQ709C8 RPSAP43-201ENST00000402237 625 ntBASIC15.61■□□□□ 0.09
VPS13CQ709C8 KRT18P58-201ENST00000527480 1120 ntBASIC15.61■□□□□ 0.09
VPS13CQ709C8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS13CQ709C8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.61■□□□□ 0.09
VPS13CQ709C8 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS13CQ709C8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS13CQ709C8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS13CQ709C8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS13CQ709C8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.61■□□□□ 0.09
VPS13CQ709C8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS13CQ709C8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS13CQ709C8 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS13CQ709C8 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms