Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
C9orf139Q6ZV77 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
C9orf139Q6ZV77 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 HCG4P8-203ENST00000443049 980 ntBASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
C9orf139Q6ZV77 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
C9orf139Q6ZV77 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C9orf139Q6ZV77 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C9orf139Q6ZV77 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C9orf139Q6ZV77 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
C9orf139Q6ZV77 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C9orf139Q6ZV77 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.15■□□□□ 0.02
C9orf139Q6ZV77 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.15■□□□□ 0.02
C9orf139Q6ZV77 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
C9orf139Q6ZV77 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
C9orf139Q6ZV77 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
C9orf139Q6ZV77 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C9orf139Q6ZV77 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
C9orf139Q6ZV77 TEX21P-204ENST00000641479 1693 ntBASIC15.15■□□□□ 0.02
C9orf139Q6ZV77 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
C9orf139Q6ZV77 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
C9orf139Q6ZV77 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
C9orf139Q6ZV77 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C9orf139Q6ZV77 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
C9orf139Q6ZV77 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 AC138932.1-201ENST00000534164 6830 ntBASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 HOXB1-202ENST00000577092 1414 ntBASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.14■□□□□ 0.01
C9orf139Q6ZV77 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
C9orf139Q6ZV77 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.13■□□□□ 0.01
C9orf139Q6ZV77 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC15.13■□□□□ 0.01
C9orf139Q6ZV77 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
C9orf139Q6ZV77 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.13■□□□□ 0.01
C9orf139Q6ZV77 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
C9orf139Q6ZV77 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
C9orf139Q6ZV77 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
C9orf139Q6ZV77 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
C9orf139Q6ZV77 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms