Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 CHCHD2P8-201ENST00000429873 447 ntBASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 KRT18P23-201ENST00000435622 1283 ntBASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 UNC93B7-201ENST00000509439 705 ntBASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC149Q6ZUS6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 AC093525.10-201ENST00000625130 1569 ntBASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 HOXB1-202ENST00000577092 1414 ntBASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 IFNL4P1-201ENST00000607083 540 ntBASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 AC079602.3-201ENST00000623931 403 ntBASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC149Q6ZUS6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 AL391807.1-203ENST00000604392 2365 ntBASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 PVRIG2P-201ENST00000435460 978 ntBASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 FEM1AP3-201ENST00000403722 1741 ntBASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC149Q6ZUS6 AC008556.1-201ENST00000610908 2040 ntBASIC19.69■□□□□ 0.74
CCDC149Q6ZUS6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC149Q6ZUS6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC149Q6ZUS6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC149Q6ZUS6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC149Q6ZUS6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC149Q6ZUS6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.69■□□□□ 0.74
CCDC149Q6ZUS6 AC104390.1-201ENST00000555663 520 ntBASIC19.69■□□□□ 0.74
CCDC149Q6ZUS6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC149Q6ZUS6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC149Q6ZUS6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC149Q6ZUS6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC149Q6ZUS6 AC073130.3-201ENST00000624389 2278 ntBASIC19.69■□□□□ 0.74
CCDC149Q6ZUS6 KRT18P1-202ENST00000452408 1331 ntBASIC19.69■□□□□ 0.74
CCDC149Q6ZUS6 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC149Q6ZUS6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms