Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.52■□□□□ 0.72
LRRC38Q5VT99 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC38Q5VT99 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC38Q5VT99 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
LRRC38Q5VT99 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC38Q5VT99 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC38Q5VT99 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC38Q5VT99 KRT18P41-201ENST00000518924 1277 ntBASIC19.52■□□□□ 0.72
LRRC38Q5VT99 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.52■□□□□ 0.72
LRRC38Q5VT99 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.52■□□□□ 0.72
LRRC38Q5VT99 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.52■□□□□ 0.72
LRRC38Q5VT99 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.52■□□□□ 0.72
LRRC38Q5VT99 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
LRRC38Q5VT99 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
LRRC38Q5VT99 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.52■□□□□ 0.72
LRRC38Q5VT99 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
LRRC38Q5VT99 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
LRRC38Q5VT99 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
LRRC38Q5VT99 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRRC38Q5VT99 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
LRRC38Q5VT99 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.52■□□□□ 0.71
LRRC38Q5VT99 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.52■□□□□ 0.71
LRRC38Q5VT99 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 UBE2SP1-201ENST00000450587 669 ntBASIC19.51■□□□□ 0.71
LRRC38Q5VT99 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 AC142381.4-202ENST00000563973 229 ntBASIC19.51■□□□□ 0.71
LRRC38Q5VT99 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC38Q5VT99 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.5■□□□□ 0.71
LRRC38Q5VT99 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRC38Q5VT99 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC38Q5VT99 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC38Q5VT99 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LRRC38Q5VT99 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC38Q5VT99 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC38Q5VT99 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC38Q5VT99 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC38Q5VT99 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC38Q5VT99 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
LRRC38Q5VT99 AC012618.2-201ENST00000428058 849 ntBASIC19.5■□□□□ 0.71
LRRC38Q5VT99 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC38Q5VT99 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRC38Q5VT99 NUDT16P1-203ENST00000513809 620 ntBASIC19.5■□□□□ 0.71
LRRC38Q5VT99 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.5■□□□□ 0.71
LRRC38Q5VT99 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRC38Q5VT99 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC38Q5VT99 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
LRRC38Q5VT99 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC38Q5VT99 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC38Q5VT99 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC38Q5VT99 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC38Q5VT99 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC38Q5VT99 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC38Q5VT99 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
LRRC38Q5VT99 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
LRRC38Q5VT99 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC38Q5VT99 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.49■□□□□ 0.71
LRRC38Q5VT99 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC38Q5VT99 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.49■□□□□ 0.71
LRRC38Q5VT99 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
LRRC38Q5VT99 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC38Q5VT99 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC38Q5VT99 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC38Q5VT99 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC38Q5VT99 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.49■□□□□ 0.71
LRRC38Q5VT99 RPS2P55-201ENST00000397318 883 ntBASIC19.49■□□□□ 0.71
LRRC38Q5VT99 GCSHP5-201ENST00000443090 522 ntBASIC19.49■□□□□ 0.71
LRRC38Q5VT99 AC098590.1-201ENST00000468126 897 ntBASIC19.49■□□□□ 0.71
LRRC38Q5VT99 AC107956.1-201ENST00000494359 873 ntBASIC19.49■□□□□ 0.71
LRRC38Q5VT99 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC38Q5VT99 AP001412.1-201ENST00000608405 714 ntBASIC19.49■□□□□ 0.71
LRRC38Q5VT99 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
LRRC38Q5VT99 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC38Q5VT99 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC38Q5VT99 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC38Q5VT99 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms