Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 MIR3180-5-201ENST00000583743 153 ntBASIC16.5■□□□□ 0.23
FREM1Q5H8C1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 HYMAI.1-201ENST00000620949 238 ntBASIC16.5■□□□□ 0.23
FREM1Q5H8C1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.5■□□□□ 0.23
FREM1Q5H8C1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.49■□□□□ 0.23
FREM1Q5H8C1 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FREM1Q5H8C1 AC005082.1-201ENST00000413042 2259 ntBASIC16.49■□□□□ 0.23
FREM1Q5H8C1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FREM1Q5H8C1 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
FREM1Q5H8C1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FREM1Q5H8C1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
FREM1Q5H8C1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
FREM1Q5H8C1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FREM1Q5H8C1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FREM1Q5H8C1 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
FREM1Q5H8C1 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FREM1Q5H8C1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FREM1Q5H8C1 AC112907.2-201ENST00000448639 330 ntBASIC16.49■□□□□ 0.23
FREM1Q5H8C1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.49■□□□□ 0.23
FREM1Q5H8C1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
FREM1Q5H8C1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FREM1Q5H8C1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
FREM1Q5H8C1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FREM1Q5H8C1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
FREM1Q5H8C1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.49■□□□□ 0.23
FREM1Q5H8C1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
FREM1Q5H8C1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.49■□□□□ 0.23
FREM1Q5H8C1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
FREM1Q5H8C1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.49■□□□□ 0.23
FREM1Q5H8C1 HOXB1-202ENST00000577092 1414 ntBASIC16.49■□□□□ 0.23
FREM1Q5H8C1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 SPDYE15P-201ENST00000424157 909 ntBASIC16.48■□□□□ 0.23
FREM1Q5H8C1 MCCD1P1-208ENST00000445732 328 ntBASIC16.48■□□□□ 0.23
FREM1Q5H8C1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 LINC01238-205ENST00000567549 1107 ntBASIC16.48■□□□□ 0.23
FREM1Q5H8C1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 AC098818.2-201ENST00000564925 2320 ntBASIC16.48■□□□□ 0.23
FREM1Q5H8C1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 HLA-F-220ENST00000434407 884 ntBASIC16.48■□□□□ 0.23
FREM1Q5H8C1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 AL499627.1-201ENST00000569373 2188 ntBASIC16.48■□□□□ 0.23
FREM1Q5H8C1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
FREM1Q5H8C1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
FREM1Q5H8C1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FREM1Q5H8C1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FREM1Q5H8C1 AL109659.2-201ENST00000606809 1674 ntBASIC16.47■□□□□ 0.23
FREM1Q5H8C1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FREM1Q5H8C1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
FREM1Q5H8C1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
FREM1Q5H8C1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FREM1Q5H8C1 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FREM1Q5H8C1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
FREM1Q5H8C1 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.47■□□□□ 0.23
FREM1Q5H8C1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FREM1Q5H8C1 VENTXP5-201ENST00000523979 775 ntBASIC16.47■□□□□ 0.23
FREM1Q5H8C1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.47■□□□□ 0.23
FREM1Q5H8C1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms