Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC9.45□□□□□ -0.9
LINC01554Q52M75 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 NORAD-201ENST00000565493 5339 ntBASIC9.45□□□□□ -0.9
LINC01554Q52M75 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LINC01554Q52M75 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
LINC01554Q52M75 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
LINC01554Q52M75 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
LINC01554Q52M75 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
LINC01554Q52M75 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
LINC01554Q52M75 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
LINC01554Q52M75 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC9.44□□□□□ -0.9
LINC01554Q52M75 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
LINC01554Q52M75 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 OR2A1-AS1-204ENST00000470435 602 ntBASIC9.44□□□□□ -0.9
LINC01554Q52M75 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 SRR-208ENST00000576848 588 ntTSL 4 BASIC9.44□□□□□ -0.9
LINC01554Q52M75 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC9.44□□□□□ -0.9
LINC01554Q52M75 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC9.44□□□□□ -0.9
LINC01554Q52M75 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
LINC01554Q52M75 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC9.44□□□□□ -0.9
LINC01554Q52M75 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
LINC01554Q52M75 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC9.44□□□□□ -0.9
LINC01554Q52M75 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC9.44□□□□□ -0.9
LINC01554Q52M75 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 SBF1P1-201ENST00000444527 5631 ntBASIC9.44□□□□□ -0.9
LINC01554Q52M75 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC9.44□□□□□ -0.9
LINC01554Q52M75 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
LINC01554Q52M75 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
LINC01554Q52M75 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
LINC01554Q52M75 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 SLC9A3P3-201ENST00000457608 2229 ntBASIC9.43□□□□□ -0.9
LINC01554Q52M75 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
LINC01554Q52M75 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
LINC01554Q52M75 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms