Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTPN20Q4JDL3 AC007663.1-201ENST00000438948 1240 ntBASIC19.76■□□□□ 0.75
PTPN20Q4JDL3 MCCD1P1-208ENST00000445732 328 ntBASIC19.76■□□□□ 0.75
PTPN20Q4JDL3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PTPN20Q4JDL3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.76■□□□□ 0.75
PTPN20Q4JDL3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN20Q4JDL3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN20Q4JDL3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.75■□□□□ 0.75
PTPN20Q4JDL3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PTPN20Q4JDL3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN20Q4JDL3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN20Q4JDL3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN20Q4JDL3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN20Q4JDL3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN20Q4JDL3 TSPY17P-201ENST00000450329 467 ntBASIC19.75■□□□□ 0.75
PTPN20Q4JDL3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPN20Q4JDL3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
PTPN20Q4JDL3 NAPSB-206ENST00000562112 1266 ntBASIC19.75■□□□□ 0.75
PTPN20Q4JDL3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN20Q4JDL3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
PTPN20Q4JDL3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN20Q4JDL3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN20Q4JDL3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PTPN20Q4JDL3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN20Q4JDL3 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN20Q4JDL3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPN20Q4JDL3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 CCR12P-201ENST00000446203 998 ntBASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 EGLN1P1-201ENST00000531623 762 ntBASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 AC116562.4-202ENST00000641738 218 ntBASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPN20Q4JDL3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPN20Q4JDL3 AC104581.1-202ENST00000635932 2618 ntBASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 AC087499.1-201ENST00000418141 1075 ntBASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 AC036111.1-201ENST00000533973 1582 ntBASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPN20Q4JDL3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms