Protein–RNA interactions for Protein: Q06547

GABPB1, GA-binding protein subunit beta-1, humanhuman

Predicted RBP Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1Q06547 AL136379.1-201ENST00000623471 2642 ntBASIC19.24■□□□□ 0.67
GABPB1Q06547 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
GABPB1Q06547 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABPB1Q06547 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABPB1Q06547 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GABPB1Q06547 PCDHB17P-201ENST00000539533 2393 ntBASIC19.24■□□□□ 0.67
GABPB1Q06547 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABPB1Q06547 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABPB1Q06547 FAM21FP-204ENST00000608637 956 ntBASIC19.24■□□□□ 0.67
GABPB1Q06547 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABPB1Q06547 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.24■□□□□ 0.67
GABPB1Q06547 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABPB1Q06547 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
GABPB1Q06547 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABPB1Q06547 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABPB1Q06547 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABPB1Q06547 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
GABPB1Q06547 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABPB1Q06547 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
GABPB1Q06547 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GABPB1Q06547 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
GABPB1Q06547 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.23■□□□□ 0.67
GABPB1Q06547 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABPB1Q06547 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
GABPB1Q06547 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GABPB1Q06547 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GABPB1Q06547 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABPB1Q06547 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABPB1Q06547 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABPB1Q06547 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABPB1Q06547 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABPB1Q06547 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
GABPB1Q06547 DUX4L18-201ENST00000553347 1267 ntBASIC19.23■□□□□ 0.67
GABPB1Q06547 AL117332.1-201ENST00000622628 974 ntBASIC19.23■□□□□ 0.67
GABPB1Q06547 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABPB1Q06547 FLJ13224-201ENST00000313737 1514 ntBASIC19.23■□□□□ 0.67
GABPB1Q06547 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GABPB1Q06547 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABPB1Q06547 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABPB1Q06547 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABPB1Q06547 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABPB1Q06547 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
GABPB1Q06547 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
GABPB1Q06547 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABPB1Q06547 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GABPB1Q06547 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
GABPB1Q06547 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
GABPB1Q06547 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.23■□□□□ 0.67
GABPB1Q06547 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GABPB1Q06547 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
GABPB1Q06547 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
GABPB1Q06547 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GABPB1Q06547 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GABPB1Q06547 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GABPB1Q06547 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GABPB1Q06547 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GABPB1Q06547 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GABPB1Q06547 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
GABPB1Q06547 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GABPB1Q06547 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.22■□□□□ 0.67
GABPB1Q06547 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.22■□□□□ 0.67
GABPB1Q06547 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.22■□□□□ 0.67
GABPB1Q06547 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.22■□□□□ 0.67
GABPB1Q06547 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.22■□□□□ 0.67
GABPB1Q06547 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.22■□□□□ 0.67
GABPB1Q06547 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.22■□□□□ 0.67
GABPB1Q06547 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GABPB1Q06547 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.22■□□□□ 0.67
GABPB1Q06547 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.22■□□□□ 0.67
GABPB1Q06547 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GABPB1Q06547 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
GABPB1Q06547 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
GABPB1Q06547 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GABPB1Q06547 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GABPB1Q06547 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
GABPB1Q06547 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.22■□□□□ 0.67
GABPB1Q06547 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GABPB1Q06547 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
GABPB1Q06547 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.22■□□□□ 0.67
GABPB1Q06547 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.22■□□□□ 0.67
GABPB1Q06547 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GABPB1Q06547 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GABPB1Q06547 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GABPB1Q06547 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.21■□□□□ 0.67
GABPB1Q06547 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GABPB1Q06547 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
GABPB1Q06547 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
GABPB1Q06547 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
GABPB1Q06547 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.21■□□□□ 0.67
GABPB1Q06547 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GABPB1Q06547 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
GABPB1Q06547 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GABPB1Q06547 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.21■□□□□ 0.67
GABPB1Q06547 RARRES2P2-201ENST00000394842 485 ntBASIC19.21■□□□□ 0.67
GABPB1Q06547 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GABPB1Q06547 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GABPB1Q06547 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.21■□□□□ 0.67
GABPB1Q06547 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GABPB1Q06547 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.21■□□□□ 0.67
GABPB1Q06547 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms