Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SEC61A1P61619 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SEC61A1P61619 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SEC61A1P61619 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SEC61A1P61619 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SEC61A1P61619 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SEC61A1P61619 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SEC61A1P61619 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.44■□□□□ 0.22
SEC61A1P61619 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.44■□□□□ 0.22
SEC61A1P61619 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SEC61A1P61619 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SEC61A1P61619 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SEC61A1P61619 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.44■□□□□ 0.22
SEC61A1P61619 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
SEC61A1P61619 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SEC61A1P61619 PHGDH-210ENST00000641115 1638 ntBASIC16.44■□□□□ 0.22
SEC61A1P61619 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SEC61A1P61619 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SEC61A1P61619 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
SEC61A1P61619 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.44■□□□□ 0.22
SEC61A1P61619 BICD1-207ENST00000551848 1962 ntBASIC16.44■□□□□ 0.22
SEC61A1P61619 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SEC61A1P61619 AL354751.1-201ENST00000412768 1863 ntBASIC16.44■□□□□ 0.22
SEC61A1P61619 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC61A1P61619 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC61A1P61619 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC61A1P61619 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.43■□□□□ 0.22
SEC61A1P61619 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC61A1P61619 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC61A1P61619 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC61A1P61619 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC61A1P61619 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC61A1P61619 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SEC61A1P61619 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SEC61A1P61619 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.43■□□□□ 0.22
SEC61A1P61619 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC61A1P61619 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SEC61A1P61619 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.43■□□□□ 0.22
SEC61A1P61619 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SEC61A1P61619 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.43■□□□□ 0.22
SEC61A1P61619 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SEC61A1P61619 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
SEC61A1P61619 AC012618.2-201ENST00000428058 849 ntBASIC16.43■□□□□ 0.22
SEC61A1P61619 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.43■□□□□ 0.22
SEC61A1P61619 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.43■□□□□ 0.22
SEC61A1P61619 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SEC61A1P61619 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.43■□□□□ 0.22
SEC61A1P61619 AC233702.5-201ENST00000584107 538 ntBASIC16.43■□□□□ 0.22
SEC61A1P61619 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SEC61A1P61619 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC61A1P61619 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SEC61A1P61619 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC61A1P61619 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SEC61A1P61619 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC61A1P61619 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC61A1P61619 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC61A1P61619 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.43■□□□□ 0.22
SEC61A1P61619 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC61A1P61619 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.43■□□□□ 0.22
SEC61A1P61619 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC61A1P61619 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SEC61A1P61619 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SEC61A1P61619 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SEC61A1P61619 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SEC61A1P61619 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 TSPY7P-201ENST00000431358 1114 ntBASIC16.42■□□□□ 0.22
SEC61A1P61619 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.42■□□□□ 0.22
SEC61A1P61619 MIR4497-201ENST00000583208 89 ntBASIC16.42■□□□□ 0.22
SEC61A1P61619 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SEC61A1P61619 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.42■□□□□ 0.22
SEC61A1P61619 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SEC61A1P61619 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.42■□□□□ 0.22
SEC61A1P61619 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61A1P61619 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SEC61A1P61619 AC018553.1-201ENST00000616682 1458 ntBASIC16.42■□□□□ 0.22
SEC61A1P61619 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61A1P61619 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61A1P61619 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms