Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PEX3P56589 AC141257.4-201ENST00000634557 245 ntBASIC20.69■□□□□ 0.9
PEX3P56589 AC136944.6-201ENST00000634818 245 ntBASIC20.69■□□□□ 0.9
PEX3P56589 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
PEX3P56589 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PEX3P56589 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PEX3P56589 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PEX3P56589 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.69■□□□□ 0.9
PEX3P56589 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PEX3P56589 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PEX3P56589 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PEX3P56589 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PEX3P56589 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PEX3P56589 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.68■□□□□ 0.9
PEX3P56589 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEX3P56589 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEX3P56589 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEX3P56589 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PEX3P56589 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEX3P56589 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.68■□□□□ 0.9
PEX3P56589 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEX3P56589 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEX3P56589 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PEX3P56589 TMPOP1-202ENST00000424642 1267 ntBASIC20.68■□□□□ 0.9
PEX3P56589 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.68■□□□□ 0.9
PEX3P56589 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.68■□□□□ 0.9
PEX3P56589 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PEX3P56589 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.68■□□□□ 0.9
PEX3P56589 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.68■□□□□ 0.9
PEX3P56589 WWOX-216ENST00000569818 525 ntBASIC20.68■□□□□ 0.9
PEX3P56589 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.68■□□□□ 0.9
PEX3P56589 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.68■□□□□ 0.9
PEX3P56589 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEX3P56589 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEX3P56589 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.68■□□□□ 0.9
PEX3P56589 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEX3P56589 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PEX3P56589 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
PEX3P56589 AC087289.5-201ENST00000586076 3175 ntBASIC20.68■□□□□ 0.9
PEX3P56589 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEX3P56589 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEX3P56589 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEX3P56589 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PEX3P56589 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.68■□□□□ 0.9
PEX3P56589 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PEX3P56589 AC098818.2-201ENST00000564925 2320 ntBASIC20.67■□□□□ 0.9
PEX3P56589 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.67■□□□□ 0.9
PEX3P56589 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PEX3P56589 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PEX3P56589 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PEX3P56589 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PEX3P56589 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.67■□□□□ 0.9
PEX3P56589 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.67■□□□□ 0.9
PEX3P56589 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PEX3P56589 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.67■□□□□ 0.9
PEX3P56589 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PEX3P56589 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC20.67■□□□□ 0.9
PEX3P56589 AC009947.2-201ENST00000444014 672 ntBASIC20.67■□□□□ 0.9
PEX3P56589 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.67■□□□□ 0.9
PEX3P56589 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.67■□□□□ 0.9
PEX3P56589 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
PEX3P56589 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.67■□□□□ 0.9
PEX3P56589 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PEX3P56589 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PEX3P56589 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PEX3P56589 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
PEX3P56589 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PEX3P56589 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PEX3P56589 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PEX3P56589 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.67■□□□□ 0.9
PEX3P56589 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.67■□□□□ 0.9
PEX3P56589 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PEX3P56589 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.67■□□□□ 0.9
PEX3P56589 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.67■□□□□ 0.9
PEX3P56589 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PEX3P56589 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.66■□□□□ 0.9
PEX3P56589 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.66■□□□□ 0.9
PEX3P56589 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PEX3P56589 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PEX3P56589 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PEX3P56589 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.66■□□□□ 0.9
PEX3P56589 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.66■□□□□ 0.9
PEX3P56589 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.66■□□□□ 0.9
PEX3P56589 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.66■□□□□ 0.9
PEX3P56589 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PEX3P56589 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PEX3P56589 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PEX3P56589 MTMR9LP-203ENST00000426597 1545 ntBASIC20.66■□□□□ 0.9
PEX3P56589 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PEX3P56589 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PEX3P56589 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PEX3P56589 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.66■□□□□ 0.9
PEX3P56589 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PEX3P56589 AC018445.3-201ENST00000624177 1945 ntBASIC20.66■□□□□ 0.9
PEX3P56589 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.66■□□□□ 0.9
PEX3P56589 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PEX3P56589 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PEX3P56589 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PEX3P56589 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.65■□□□□ 0.9
PEX3P56589 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms