Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
AP1S2P56377 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S2P56377 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S2P56377 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.28■□□□□ 0.52
AP1S2P56377 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S2P56377 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S2P56377 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.28■□□□□ 0.52
AP1S2P56377 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S2P56377 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S2P56377 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S2P56377 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.28■□□□□ 0.52
AP1S2P56377 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S2P56377 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.28■□□□□ 0.52
AP1S2P56377 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.28■□□□□ 0.52
AP1S2P56377 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S2P56377 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
AP1S2P56377 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S2P56377 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S2P56377 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.28■□□□□ 0.52
AP1S2P56377 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S2P56377 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.28■□□□□ 0.52
AP1S2P56377 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S2P56377 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.28■□□□□ 0.52
AP1S2P56377 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S2P56377 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.28■□□□□ 0.52
AP1S2P56377 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S2P56377 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP1S2P56377 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S2P56377 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.27■□□□□ 0.52
AP1S2P56377 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.27■□□□□ 0.52
AP1S2P56377 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.27■□□□□ 0.52
AP1S2P56377 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.27■□□□□ 0.52
AP1S2P56377 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.27■□□□□ 0.52
AP1S2P56377 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
AP1S2P56377 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S2P56377 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S2P56377 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S2P56377 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S2P56377 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
AP1S2P56377 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S2P56377 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S2P56377 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S2P56377 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
AP1S2P56377 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.27■□□□□ 0.52
AP1S2P56377 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.27■□□□□ 0.52
AP1S2P56377 SLC25A1P2-201ENST00000430693 912 ntBASIC18.27■□□□□ 0.52
AP1S2P56377 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.27■□□□□ 0.52
AP1S2P56377 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.27■□□□□ 0.52
AP1S2P56377 FITM1-202ENST00000559294 800 ntBASIC18.27■□□□□ 0.52
AP1S2P56377 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S2P56377 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.27■□□□□ 0.52
AP1S2P56377 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
AP1S2P56377 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.27■□□□□ 0.52
AP1S2P56377 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP1S2P56377 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP1S2P56377 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
AP1S2P56377 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
AP1S2P56377 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP1S2P56377 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
AP1S2P56377 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S2P56377 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S2P56377 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S2P56377 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
AP1S2P56377 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
AP1S2P56377 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S2P56377 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
AP1S2P56377 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S2P56377 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S2P56377 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S2P56377 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.26■□□□□ 0.51
AP1S2P56377 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.26■□□□□ 0.51
AP1S2P56377 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
AP1S2P56377 AC008622.2-201ENST00000617006 1229 ntBASIC18.26■□□□□ 0.51
AP1S2P56377 MYC-208ENST00000641036 567 ntBASIC18.26■□□□□ 0.51
AP1S2P56377 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S2P56377 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S2P56377 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.26■□□□□ 0.51
AP1S2P56377 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.26■□□□□ 0.51
AP1S2P56377 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S2P56377 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.26■□□□□ 0.51
AP1S2P56377 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.26■□□□□ 0.51
AP1S2P56377 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
AP1S2P56377 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S2P56377 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.26■□□□□ 0.51
AP1S2P56377 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.26■□□□□ 0.51
AP1S2P56377 AC079598.2-202ENST00000546624 1451 ntBASIC18.26■□□□□ 0.51
AP1S2P56377 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S2P56377 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
AP1S2P56377 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.25■□□□□ 0.51
AP1S2P56377 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S2P56377 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S2P56377 WIZP1-201ENST00000531444 2299 ntBASIC18.25■□□□□ 0.51
AP1S2P56377 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
AP1S2P56377 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S2P56377 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S2P56377 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.25■□□□□ 0.51
AP1S2P56377 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.25■□□□□ 0.51
AP1S2P56377 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP1S2P56377 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.25■□□□□ 0.51
AP1S2P56377 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms