Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXG1P55316 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
FOXG1P55316 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FOXG1P55316 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
FOXG1P55316 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.47■□□□□ 0.23
FOXG1P55316 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXG1P55316 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FOXG1P55316 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.46■□□□□ 0.23
FOXG1P55316 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FOXG1P55316 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXG1P55316 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXG1P55316 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXG1P55316 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FOXG1P55316 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXG1P55316 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXG1P55316 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FOXG1P55316 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FOXG1P55316 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXG1P55316 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXG1P55316 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXG1P55316 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXG1P55316 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.46■□□□□ 0.23
FOXG1P55316 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXG1P55316 MIR1224-201ENST00000408193 85 ntBASIC16.46■□□□□ 0.23
FOXG1P55316 DUX4L26-201ENST00000489078 1255 ntBASIC16.46■□□□□ 0.23
FOXG1P55316 YBX1P2-201ENST00000489612 999 ntBASIC16.46■□□□□ 0.23
FOXG1P55316 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.46■□□□□ 0.23
FOXG1P55316 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.46■□□□□ 0.23
FOXG1P55316 AL441883.1-201ENST00000566170 1045 ntBASIC16.46■□□□□ 0.23
FOXG1P55316 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.46■□□□□ 0.23
FOXG1P55316 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.46■□□□□ 0.23
FOXG1P55316 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXG1P55316 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXG1P55316 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXG1P55316 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXG1P55316 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXG1P55316 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FOXG1P55316 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.46■□□□□ 0.23
FOXG1P55316 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
FOXG1P55316 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
FOXG1P55316 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
FOXG1P55316 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXG1P55316 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXG1P55316 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXG1P55316 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXG1P55316 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXG1P55316 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXG1P55316 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXG1P55316 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXG1P55316 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXG1P55316 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXG1P55316 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXG1P55316 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXG1P55316 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
FOXG1P55316 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXG1P55316 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXG1P55316 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXG1P55316 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXG1P55316 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXG1P55316 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.45■□□□□ 0.22
FOXG1P55316 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXG1P55316 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.45■□□□□ 0.22
FOXG1P55316 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXG1P55316 AK4P3-201ENST00000418260 669 ntBASIC16.45■□□□□ 0.22
FOXG1P55316 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.45■□□□□ 0.22
FOXG1P55316 COX11P1-201ENST00000489116 835 ntBASIC16.45■□□□□ 0.22
FOXG1P55316 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXG1P55316 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.45■□□□□ 0.22
FOXG1P55316 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
FOXG1P55316 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXG1P55316 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXG1P55316 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.45■□□□□ 0.22
FOXG1P55316 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.45■□□□□ 0.22
FOXG1P55316 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXG1P55316 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXG1P55316 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FOXG1P55316 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FOXG1P55316 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXG1P55316 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
FOXG1P55316 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
FOXG1P55316 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
FOXG1P55316 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXG1P55316 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.44■□□□□ 0.22
FOXG1P55316 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXG1P55316 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
FOXG1P55316 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.44■□□□□ 0.22
FOXG1P55316 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXG1P55316 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.44■□□□□ 0.22
FOXG1P55316 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
FOXG1P55316 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
FOXG1P55316 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.44■□□□□ 0.22
FOXG1P55316 AC010331.1-201ENST00000611423 582 ntBASIC16.44■□□□□ 0.22
FOXG1P55316 AC083906.6-201ENST00000641366 219 ntBASIC16.44■□□□□ 0.22
FOXG1P55316 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.44■□□□□ 0.22
FOXG1P55316 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXG1P55316 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
FOXG1P55316 AL357033.4-201ENST00000617703 1807 ntBASIC16.44■□□□□ 0.22
FOXG1P55316 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXG1P55316 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
FOXG1P55316 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms