Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACLYP53396 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ACLYP53396 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.7■□□□□ 0.9
ACLYP53396 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.7■□□□□ 0.9
ACLYP53396 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACLYP53396 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.69■□□□□ 0.9
ACLYP53396 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ACLYP53396 NSUN5P1-202ENST00000421140 1535 ntBASIC20.69■□□□□ 0.9
ACLYP53396 NSUN5P2-203ENST00000457352 1529 ntBASIC20.69■□□□□ 0.9
ACLYP53396 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACLYP53396 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACLYP53396 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACLYP53396 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACLYP53396 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACLYP53396 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.69■□□□□ 0.9
ACLYP53396 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACLYP53396 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.69■□□□□ 0.9
ACLYP53396 REXO1L6P-202ENST00000619970 1078 ntBASIC20.69■□□□□ 0.9
ACLYP53396 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ACLYP53396 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACLYP53396 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACLYP53396 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ACLYP53396 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACLYP53396 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ACLYP53396 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ACLYP53396 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ACLYP53396 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACLYP53396 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACLYP53396 AC006333.2-201ENST00000607957 2099 ntBASIC20.68■□□□□ 0.9
ACLYP53396 AC034236.2-201ENST00000606662 1610 ntBASIC20.68■□□□□ 0.9
ACLYP53396 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACLYP53396 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ACLYP53396 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACLYP53396 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACLYP53396 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.68■□□□□ 0.9
ACLYP53396 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.68■□□□□ 0.9
ACLYP53396 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
ACLYP53396 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.68■□□□□ 0.9
ACLYP53396 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ACLYP53396 AC024563.2-201ENST00000603282 481 ntBASIC20.68■□□□□ 0.9
ACLYP53396 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.68■□□□□ 0.9
ACLYP53396 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
ACLYP53396 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACLYP53396 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ACLYP53396 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ACLYP53396 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.67■□□□□ 0.9
ACLYP53396 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACLYP53396 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.67■□□□□ 0.9
ACLYP53396 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACLYP53396 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ACLYP53396 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACLYP53396 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ACLYP53396 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACLYP53396 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACLYP53396 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACLYP53396 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACLYP53396 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACLYP53396 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACLYP53396 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.67■□□□□ 0.9
ACLYP53396 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
ACLYP53396 AF238378.1-201ENST00000526806 358 ntBASIC20.67■□□□□ 0.9
ACLYP53396 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ACLYP53396 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACLYP53396 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.67■□□□□ 0.9
ACLYP53396 AP005901.3-202ENST00000581653 237 ntBASIC20.67■□□□□ 0.9
ACLYP53396 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.67■□□□□ 0.9
ACLYP53396 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.67■□□□□ 0.9
ACLYP53396 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.67■□□□□ 0.9
ACLYP53396 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.67■□□□□ 0.9
ACLYP53396 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.67■□□□□ 0.9
ACLYP53396 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.67■□□□□ 0.9
ACLYP53396 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ACLYP53396 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.67■□□□□ 0.9
ACLYP53396 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACLYP53396 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACLYP53396 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ACLYP53396 KRT8P32-201ENST00000512863 1461 ntBASIC20.67■□□□□ 0.9
ACLYP53396 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.67■□□□□ 0.9
ACLYP53396 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ACLYP53396 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ACLYP53396 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ACLYP53396 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ACLYP53396 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ACLYP53396 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
ACLYP53396 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
ACLYP53396 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ACLYP53396 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ACLYP53396 NUS1P2-201ENST00000417358 873 ntBASIC20.66■□□□□ 0.9
ACLYP53396 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.66■□□□□ 0.9
ACLYP53396 VENTXP7-201ENST00000475503 772 ntBASIC20.66■□□□□ 0.9
ACLYP53396 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ACLYP53396 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.66■□□□□ 0.9
ACLYP53396 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.66■□□□□ 0.9
ACLYP53396 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
ACLYP53396 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.66■□□□□ 0.9
ACLYP53396 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ACLYP53396 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.66■□□□□ 0.9
ACLYP53396 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.66■□□□□ 0.9
ACLYP53396 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.66■□□□□ 0.9
ACLYP53396 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms