Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18■□□□□ 0.47
POLR2JP52435 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18■□□□□ 0.47
POLR2JP52435 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR2JP52435 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR2JP52435 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18■□□□□ 0.47
POLR2JP52435 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
POLR2JP52435 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18■□□□□ 0.47
POLR2JP52435 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18■□□□□ 0.47
POLR2JP52435 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18■□□□□ 0.47
POLR2JP52435 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18■□□□□ 0.47
POLR2JP52435 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18■□□□□ 0.47
POLR2JP52435 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18■□□□□ 0.47
POLR2JP52435 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2JP52435 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2JP52435 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2JP52435 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.99■□□□□ 0.47
POLR2JP52435 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
POLR2JP52435 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.99■□□□□ 0.47
POLR2JP52435 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
POLR2JP52435 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
POLR2JP52435 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.99■□□□□ 0.47
POLR2JP52435 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.99■□□□□ 0.47
POLR2JP52435 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.99■□□□□ 0.47
POLR2JP52435 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
POLR2JP52435 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.99■□□□□ 0.47
POLR2JP52435 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.99■□□□□ 0.47
POLR2JP52435 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2JP52435 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2JP52435 AC004264.1-201ENST00000608354 794 ntBASIC17.99■□□□□ 0.47
POLR2JP52435 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.99■□□□□ 0.47
POLR2JP52435 AC133041.1-202ENST00000642053 222 ntBASIC17.99■□□□□ 0.47
POLR2JP52435 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2JP52435 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.99■□□□□ 0.47
POLR2JP52435 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2JP52435 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2JP52435 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
POLR2JP52435 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2JP52435 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2JP52435 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2JP52435 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
POLR2JP52435 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2JP52435 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2JP52435 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2JP52435 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2JP52435 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.98■□□□□ 0.47
POLR2JP52435 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.98■□□□□ 0.47
POLR2JP52435 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.98■□□□□ 0.47
POLR2JP52435 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.98■□□□□ 0.47
POLR2JP52435 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
POLR2JP52435 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.98■□□□□ 0.47
POLR2JP52435 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2JP52435 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.98■□□□□ 0.47
POLR2JP52435 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2JP52435 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2JP52435 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2JP52435 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2JP52435 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2JP52435 MTMR9LP-203ENST00000426597 1545 ntBASIC17.98■□□□□ 0.47
POLR2JP52435 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2JP52435 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
POLR2JP52435 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
POLR2JP52435 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2JP52435 AL499627.1-201ENST00000569373 2188 ntBASIC17.97■□□□□ 0.47
POLR2JP52435 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.97■□□□□ 0.47
POLR2JP52435 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.97■□□□□ 0.47
POLR2JP52435 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.97■□□□□ 0.47
POLR2JP52435 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.97■□□□□ 0.47
POLR2JP52435 AC069152.1-201ENST00000438030 544 ntBASIC17.97■□□□□ 0.47
POLR2JP52435 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.97■□□□□ 0.47
POLR2JP52435 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2JP52435 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.97■□□□□ 0.47
POLR2JP52435 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.97■□□□□ 0.47
POLR2JP52435 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2JP52435 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2JP52435 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2JP52435 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2JP52435 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2JP52435 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.97■□□□□ 0.47
POLR2JP52435 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2JP52435 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2JP52435 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2JP52435 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2JP52435 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2JP52435 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
POLR2JP52435 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.96■□□□□ 0.47
POLR2JP52435 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2JP52435 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.96■□□□□ 0.47
POLR2JP52435 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2JP52435 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2JP52435 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2JP52435 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
POLR2JP52435 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.96■□□□□ 0.47
POLR2JP52435 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
POLR2JP52435 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2JP52435 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
POLR2JP52435 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.96■□□□□ 0.47
POLR2JP52435 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.96■□□□□ 0.47
POLR2JP52435 AC068587.9-201ENST00000641814 219 ntBASIC17.96■□□□□ 0.47
POLR2JP52435 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
POLR2JP52435 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms