Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 KRT8P32-201ENST00000512863 1461 ntBASIC18.41■□□□□ 0.54
CLCNKAP51800 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCNKAP51800 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCNKAP51800 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCNKAP51800 AC009947.2-201ENST00000444014 672 ntBASIC18.41■□□□□ 0.54
CLCNKAP51800 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.41■□□□□ 0.54
CLCNKAP51800 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC18.41■□□□□ 0.54
CLCNKAP51800 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.41■□□□□ 0.54
CLCNKAP51800 AC140113.3-201ENST00000605663 199 ntBASIC18.41■□□□□ 0.54
CLCNKAP51800 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CLCNKAP51800 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCNKAP51800 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLCNKAP51800 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.41■□□□□ 0.54
CLCNKAP51800 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCNKAP51800 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.41■□□□□ 0.54
CLCNKAP51800 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLCNKAP51800 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.41■□□□□ 0.54
CLCNKAP51800 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCNKAP51800 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLCNKAP51800 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.41■□□□□ 0.54
CLCNKAP51800 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCNKAP51800 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCNKAP51800 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.4■□□□□ 0.54
CLCNKAP51800 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCNKAP51800 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCNKAP51800 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCNKAP51800 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CLCNKAP51800 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCNKAP51800 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLCNKAP51800 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLCNKAP51800 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.4■□□□□ 0.54
CLCNKAP51800 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.4■□□□□ 0.54
CLCNKAP51800 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCNKAP51800 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.4■□□□□ 0.54
CLCNKAP51800 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.4■□□□□ 0.54
CLCNKAP51800 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.4■□□□□ 0.54
CLCNKAP51800 AC022616.7-201ENST00000525383 220 ntBASIC18.4■□□□□ 0.54
CLCNKAP51800 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.4■□□□□ 0.54
CLCNKAP51800 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CLCNKAP51800 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLCNKAP51800 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CLCNKAP51800 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.4■□□□□ 0.54
CLCNKAP51800 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLCNKAP51800 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.4■□□□□ 0.54
CLCNKAP51800 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLCNKAP51800 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLCNKAP51800 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
CLCNKAP51800 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLCNKAP51800 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CLCNKAP51800 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CLCNKAP51800 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCNKAP51800 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCNKAP51800 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCNKAP51800 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.39■□□□□ 0.53
CLCNKAP51800 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.39■□□□□ 0.53
CLCNKAP51800 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CLCNKAP51800 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCNKAP51800 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLCNKAP51800 HOMER2P1-201ENST00000455653 964 ntBASIC18.39■□□□□ 0.53
CLCNKAP51800 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLCNKAP51800 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.39■□□□□ 0.53
CLCNKAP51800 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCNKAP51800 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCNKAP51800 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCNKAP51800 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.39■□□□□ 0.53
CLCNKAP51800 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCNKAP51800 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
CLCNKAP51800 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLCNKAP51800 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCNKAP51800 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCNKAP51800 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CLCNKAP51800 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CLCNKAP51800 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CLCNKAP51800 RCC2P3-201ENST00000418112 1537 ntBASIC18.39■□□□□ 0.53
CLCNKAP51800 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CLCNKAP51800 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CLCNKAP51800 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.38■□□□□ 0.53
CLCNKAP51800 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCNKAP51800 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCNKAP51800 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCNKAP51800 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCNKAP51800 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCNKAP51800 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CLCNKAP51800 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCNKAP51800 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCNKAP51800 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCNKAP51800 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCNKAP51800 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCNKAP51800 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.38■□□□□ 0.53
CLCNKAP51800 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCNKAP51800 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.38■□□□□ 0.53
CLCNKAP51800 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.38■□□□□ 0.53
CLCNKAP51800 KRT18P35-201ENST00000510488 1269 ntBASIC18.38■□□□□ 0.53
CLCNKAP51800 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.38■□□□□ 0.53
CLCNKAP51800 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.38■□□□□ 0.53
CLCNKAP51800 AL441883.1-201ENST00000566170 1045 ntBASIC18.38■□□□□ 0.53
CLCNKAP51800 AL445228.2-201ENST00000605589 952 ntBASIC18.38■□□□□ 0.53
CLCNKAP51800 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CLCNKAP51800 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.38■□□□□ 0.53
CLCNKAP51800 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms