Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP11P51784 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP11P51784 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP11P51784 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
USP11P51784 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.22■□□□□ 0.99
USP11P51784 AP000974.1-201ENST00000623909 2387 ntBASIC21.22■□□□□ 0.99
USP11P51784 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP11P51784 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP11P51784 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP11P51784 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.22■□□□□ 0.99
USP11P51784 RBM42-202ENST00000586618 771 ntTSL 3 BASIC21.22■□□□□ 0.99
USP11P51784 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP11P51784 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
USP11P51784 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.22■□□□□ 0.99
USP11P51784 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP11P51784 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
USP11P51784 AC093525.10-201ENST00000625130 1569 ntBASIC21.22■□□□□ 0.99
USP11P51784 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
USP11P51784 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
USP11P51784 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
USP11P51784 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
USP11P51784 AC034236.2-201ENST00000606662 1610 ntBASIC21.22■□□□□ 0.99
USP11P51784 HOXB1-202ENST00000577092 1414 ntBASIC21.21■□□□□ 0.99
USP11P51784 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP11P51784 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.21■□□□□ 0.99
USP11P51784 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP11P51784 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP11P51784 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP11P51784 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP11P51784 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
USP11P51784 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.21■□□□□ 0.99
USP11P51784 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
USP11P51784 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP11P51784 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
USP11P51784 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
USP11P51784 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.21■□□□□ 0.99
USP11P51784 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.21■□□□□ 0.99
USP11P51784 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.21■□□□□ 0.99
USP11P51784 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.21■□□□□ 0.99
USP11P51784 AC006011.2-201ENST00000621313 1158 ntBASIC21.21■□□□□ 0.99
USP11P51784 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.21■□□□□ 0.99
USP11P51784 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
USP11P51784 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP11P51784 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP11P51784 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.21■□□□□ 0.99
USP11P51784 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP11P51784 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP11P51784 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP11P51784 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP11P51784 Z98044.1-201ENST00000632503 1764 ntBASIC21.2■□□□□ 0.99
USP11P51784 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.2■□□□□ 0.98
USP11P51784 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP11P51784 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.2■□□□□ 0.98
USP11P51784 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP11P51784 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP11P51784 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP11P51784 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
USP11P51784 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP11P51784 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP11P51784 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP11P51784 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP11P51784 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.2■□□□□ 0.98
USP11P51784 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP11P51784 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP11P51784 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
USP11P51784 AC117947.1-201ENST00000427448 529 ntBASIC21.2■□□□□ 0.98
USP11P51784 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP11P51784 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP11P51784 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP11P51784 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP11P51784 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP11P51784 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.2■□□□□ 0.98
USP11P51784 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.2■□□□□ 0.98
USP11P51784 KRT18P41-201ENST00000518924 1277 ntBASIC21.2■□□□□ 0.98
USP11P51784 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP11P51784 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
USP11P51784 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.2■□□□□ 0.98
USP11P51784 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.2■□□□□ 0.98
USP11P51784 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.2■□□□□ 0.98
USP11P51784 AC140113.3-201ENST00000605663 199 ntBASIC21.2■□□□□ 0.98
USP11P51784 AC139887.4-201ENST00000607877 719 ntBASIC21.2■□□□□ 0.98
USP11P51784 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.2■□□□□ 0.98
USP11P51784 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP11P51784 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.2■□□□□ 0.98
USP11P51784 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
USP11P51784 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP11P51784 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP11P51784 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.2■□□□□ 0.98
USP11P51784 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP11P51784 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
USP11P51784 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP11P51784 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP11P51784 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
USP11P51784 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.19■□□□□ 0.98
USP11P51784 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.19■□□□□ 0.98
USP11P51784 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP11P51784 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP11P51784 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP11P51784 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
USP11P51784 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms