Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CHRNA3P32297 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA3P32297 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.82■□□□□ 0.76
CHRNA3P32297 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CHRNA3P32297 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA3P32297 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA3P32297 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CHRNA3P32297 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CHRNA3P32297 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA3P32297 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.82■□□□□ 0.76
CHRNA3P32297 NIFKP9-201ENST00000419265 221 ntBASIC19.82■□□□□ 0.76
CHRNA3P32297 AL355355.2-201ENST00000442321 338 ntBASIC19.82■□□□□ 0.76
CHRNA3P32297 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA3P32297 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.82■□□□□ 0.76
CHRNA3P32297 C1QL1P1-201ENST00000568105 661 ntBASIC19.82■□□□□ 0.76
CHRNA3P32297 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.82■□□□□ 0.76
CHRNA3P32297 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CHRNA3P32297 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CHRNA3P32297 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA3P32297 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA3P32297 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CHRNA3P32297 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA3P32297 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA3P32297 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA3P32297 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.81■□□□□ 0.76
CHRNA3P32297 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA3P32297 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CHRNA3P32297 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA3P32297 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA3P32297 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.81■□□□□ 0.76
CHRNA3P32297 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.81■□□□□ 0.76
CHRNA3P32297 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA3P32297 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA3P32297 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA3P32297 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA3P32297 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA3P32297 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CHRNA3P32297 KSR1P1-201ENST00000446298 240 ntBASIC19.81■□□□□ 0.76
CHRNA3P32297 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.81■□□□□ 0.76
CHRNA3P32297 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.81■□□□□ 0.76
CHRNA3P32297 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CHRNA3P32297 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA3P32297 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA3P32297 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
CHRNA3P32297 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA3P32297 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
CHRNA3P32297 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA3P32297 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA3P32297 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.81■□□□□ 0.76
CHRNA3P32297 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.81■□□□□ 0.76
CHRNA3P32297 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA3P32297 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.81■□□□□ 0.76
CHRNA3P32297 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA3P32297 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA3P32297 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA3P32297 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA3P32297 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA3P32297 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CHRNA3P32297 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CHRNA3P32297 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
CHRNA3P32297 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA3P32297 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA3P32297 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.8■□□□□ 0.76
CHRNA3P32297 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.8■□□□□ 0.76
CHRNA3P32297 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA3P32297 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA3P32297 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA3P32297 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.8■□□□□ 0.76
CHRNA3P32297 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.8■□□□□ 0.76
CHRNA3P32297 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.8■□□□□ 0.76
CHRNA3P32297 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.8■□□□□ 0.76
CHRNA3P32297 AP003071.4-201ENST00000562276 1284 ntBASIC19.8■□□□□ 0.76
CHRNA3P32297 CR392000.1-201ENST00000624770 1228 ntBASIC19.8■□□□□ 0.76
CHRNA3P32297 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA3P32297 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.8■□□□□ 0.76
CHRNA3P32297 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA3P32297 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA3P32297 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.8■□□□□ 0.76
CHRNA3P32297 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CHRNA3P32297 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA3P32297 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA3P32297 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA3P32297 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA3P32297 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA3P32297 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.79■□□□□ 0.76
CHRNA3P32297 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA3P32297 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.79■□□□□ 0.76
CHRNA3P32297 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA3P32297 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.79■□□□□ 0.76
CHRNA3P32297 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.79■□□□□ 0.76
CHRNA3P32297 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA3P32297 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA3P32297 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.79■□□□□ 0.76
CHRNA3P32297 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.79■□□□□ 0.76
CHRNA3P32297 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA3P32297 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.79■□□□□ 0.76
CHRNA3P32297 AL355075.4-201ENST00000554988 638 ntBASIC19.79■□□□□ 0.76
CHRNA3P32297 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.79■□□□□ 0.76
CHRNA3P32297 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.79■□□□□ 0.76
CHRNA3P32297 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms