Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC1P29353 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.22■□□□□ 0.35
SHC1P29353 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SHC1P29353 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.22■□□□□ 0.35
SHC1P29353 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC1P29353 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC1P29353 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.22■□□□□ 0.35
SHC1P29353 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC1P29353 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC1P29353 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
SHC1P29353 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC1P29353 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.22■□□□□ 0.35
SHC1P29353 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SHC1P29353 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC1P29353 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.22■□□□□ 0.35
SHC1P29353 AC141586.3-201ENST00000562166 1838 ntBASIC17.22■□□□□ 0.35
SHC1P29353 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC1P29353 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC1P29353 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SHC1P29353 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SHC1P29353 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SHC1P29353 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SHC1P29353 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.22■□□□□ 0.35
SHC1P29353 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHC1P29353 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SHC1P29353 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.22■□□□□ 0.35
SHC1P29353 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.22■□□□□ 0.35
SHC1P29353 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SHC1P29353 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC1P29353 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC1P29353 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC1P29353 AL161938.1-201ENST00000569833 2180 ntBASIC17.22■□□□□ 0.35
SHC1P29353 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.22■□□□□ 0.35
SHC1P29353 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SHC1P29353 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SHC1P29353 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
SHC1P29353 KRT8P9-201ENST00000558927 1449 ntBASIC17.21■□□□□ 0.35
SHC1P29353 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SHC1P29353 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.21■□□□□ 0.35
SHC1P29353 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC1P29353 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC1P29353 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHC1P29353 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.21■□□□□ 0.35
SHC1P29353 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.21■□□□□ 0.35
SHC1P29353 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC1P29353 UNC93B2-201ENST00000285383 730 ntBASIC17.21■□□□□ 0.35
SHC1P29353 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
SHC1P29353 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.21■□□□□ 0.35
SHC1P29353 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHC1P29353 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SHC1P29353 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.21■□□□□ 0.35
SHC1P29353 MIR1238-201ENST00000408483 83 ntBASIC17.21■□□□□ 0.35
SHC1P29353 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.21■□□□□ 0.35
SHC1P29353 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC1P29353 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHC1P29353 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHC1P29353 AC097488.1-201ENST00000507834 756 ntBASIC17.21■□□□□ 0.35
SHC1P29353 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.21■□□□□ 0.35
SHC1P29353 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHC1P29353 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.21■□□□□ 0.35
SHC1P29353 SLC25A1P4-201ENST00000567977 778 ntBASIC17.21■□□□□ 0.35
SHC1P29353 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SHC1P29353 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC1P29353 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC1P29353 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SHC1P29353 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SHC1P29353 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.21■□□□□ 0.35
SHC1P29353 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SHC1P29353 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SHC1P29353 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
SHC1P29353 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SHC1P29353 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SHC1P29353 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC1P29353 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHC1P29353 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC1P29353 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC1P29353 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC1P29353 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC1P29353 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC1P29353 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC1P29353 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC1P29353 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC1P29353 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.2■□□□□ 0.34
SHC1P29353 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SHC1P29353 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
SHC1P29353 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.2■□□□□ 0.34
SHC1P29353 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SHC1P29353 DGCR10-201ENST00000609839 495 ntBASIC17.2■□□□□ 0.34
SHC1P29353 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.2■□□□□ 0.34
SHC1P29353 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC1P29353 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SHC1P29353 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.2■□□□□ 0.34
SHC1P29353 AC018470.1-201ENST00000624790 3129 ntBASIC17.2■□□□□ 0.34
SHC1P29353 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SHC1P29353 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
SHC1P29353 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.2■□□□□ 0.34
SHC1P29353 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SHC1P29353 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.2■□□□□ 0.34
SHC1P29353 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.2■□□□□ 0.34
SHC1P29353 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms