Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
MMP11P24347 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
MMP11P24347 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
MMP11P24347 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.83■□□□□ 0.45
MMP11P24347 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
MMP11P24347 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
MMP11P24347 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MMP11P24347 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MMP11P24347 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MMP11P24347 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
MMP11P24347 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MMP11P24347 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
MMP11P24347 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MMP11P24347 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MMP11P24347 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.83■□□□□ 0.44
MMP11P24347 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
MMP11P24347 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.83■□□□□ 0.44
MMP11P24347 TSPY21P-201ENST00000433481 731 ntBASIC17.83■□□□□ 0.44
MMP11P24347 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.83■□□□□ 0.44
MMP11P24347 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.83■□□□□ 0.44
MMP11P24347 YBX1P2-201ENST00000489612 999 ntBASIC17.83■□□□□ 0.44
MMP11P24347 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MMP11P24347 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MMP11P24347 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
MMP11P24347 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
MMP11P24347 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
MMP11P24347 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MMP11P24347 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MMP11P24347 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP11P24347 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MMP11P24347 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
MMP11P24347 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
MMP11P24347 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP11P24347 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MMP11P24347 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP11P24347 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP11P24347 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP11P24347 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP11P24347 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
MMP11P24347 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
MMP11P24347 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.82■□□□□ 0.44
MMP11P24347 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.82■□□□□ 0.44
MMP11P24347 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
MMP11P24347 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
MMP11P24347 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP11P24347 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.82■□□□□ 0.44
MMP11P24347 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP11P24347 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP11P24347 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.82■□□□□ 0.44
MMP11P24347 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP11P24347 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
MMP11P24347 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.82■□□□□ 0.44
MMP11P24347 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
MMP11P24347 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP11P24347 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.81■□□□□ 0.44
MMP11P24347 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP11P24347 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MMP11P24347 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP11P24347 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
MMP11P24347 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP11P24347 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP11P24347 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.81■□□□□ 0.44
MMP11P24347 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
MMP11P24347 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MMP11P24347 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MMP11P24347 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP11P24347 FAM8A6P-201ENST00000407496 1135 ntBASIC17.81■□□□□ 0.44
MMP11P24347 TSPY5P-201ENST00000426936 936 ntBASIC17.81■□□□□ 0.44
MMP11P24347 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.81■□□□□ 0.44
MMP11P24347 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MMP11P24347 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.81■□□□□ 0.44
MMP11P24347 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.81■□□□□ 0.44
MMP11P24347 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.81■□□□□ 0.44
MMP11P24347 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MMP11P24347 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MMP11P24347 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MMP11P24347 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.81■□□□□ 0.44
MMP11P24347 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
MMP11P24347 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.81■□□□□ 0.44
MMP11P24347 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.81■□□□□ 0.44
MMP11P24347 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP11P24347 AL161938.1-201ENST00000569833 2180 ntBASIC17.81■□□□□ 0.44
MMP11P24347 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP11P24347 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP11P24347 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP11P24347 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
MMP11P24347 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP11P24347 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
MMP11P24347 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
MMP11P24347 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MMP11P24347 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
MMP11P24347 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.81■□□□□ 0.44
MMP11P24347 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
MMP11P24347 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.8■□□□□ 0.44
MMP11P24347 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.8■□□□□ 0.44
MMP11P24347 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.8■□□□□ 0.44
MMP11P24347 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.8■□□□□ 0.44
MMP11P24347 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
MMP11P24347 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MMP11P24347 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms