Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CAPN3P20807 TSPY21P-201ENST00000433481 731 ntBASIC18.1■□□□□ 0.49
CAPN3P20807 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.1■□□□□ 0.49
CAPN3P20807 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.1■□□□□ 0.49
CAPN3P20807 SNORA78-201ENST00000459373 127 ntBASIC18.1■□□□□ 0.49
CAPN3P20807 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CAPN3P20807 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN3P20807 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN3P20807 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.1■□□□□ 0.49
CAPN3P20807 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CAPN3P20807 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
CAPN3P20807 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CAPN3P20807 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN3P20807 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.1■□□□□ 0.49
CAPN3P20807 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN3P20807 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN3P20807 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CAPN3P20807 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN3P20807 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CAPN3P20807 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN3P20807 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN3P20807 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN3P20807 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN3P20807 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.09■□□□□ 0.49
CAPN3P20807 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN3P20807 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
CAPN3P20807 KRT17P2-201ENST00000300992 1314 ntBASIC18.09■□□□□ 0.49
CAPN3P20807 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.09■□□□□ 0.49
CAPN3P20807 TSPY23P-201ENST00000440136 739 ntBASIC18.09■□□□□ 0.49
CAPN3P20807 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.09■□□□□ 0.49
CAPN3P20807 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.09■□□□□ 0.49
CAPN3P20807 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.09■□□□□ 0.49
CAPN3P20807 AC008403.3-201ENST00000598924 454 ntBASIC18.09■□□□□ 0.49
CAPN3P20807 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CAPN3P20807 Z99916.2-201ENST00000604037 246 ntBASIC18.09■□□□□ 0.49
CAPN3P20807 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CAPN3P20807 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
CAPN3P20807 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.08■□□□□ 0.49
CAPN3P20807 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CAPN3P20807 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.08■□□□□ 0.49
CAPN3P20807 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CAPN3P20807 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.08■□□□□ 0.49
CAPN3P20807 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CAPN3P20807 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CAPN3P20807 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CAPN3P20807 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CAPN3P20807 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.08■□□□□ 0.48
CAPN3P20807 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CAPN3P20807 KRT18P21-201ENST00000515767 1272 ntBASIC18.08■□□□□ 0.48
CAPN3P20807 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.08■□□□□ 0.48
CAPN3P20807 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CAPN3P20807 RN7SL471P-201ENST00000580476 299 ntBASIC18.08■□□□□ 0.48
CAPN3P20807 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.08■□□□□ 0.48
CAPN3P20807 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.08■□□□□ 0.48
CAPN3P20807 AP000997.3-201ENST00000623333 2250 ntBASIC18.08■□□□□ 0.48
CAPN3P20807 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.08■□□□□ 0.48
CAPN3P20807 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CAPN3P20807 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CAPN3P20807 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
CAPN3P20807 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CAPN3P20807 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN3P20807 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.07■□□□□ 0.48
CAPN3P20807 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN3P20807 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CAPN3P20807 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.07■□□□□ 0.48
CAPN3P20807 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN3P20807 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN3P20807 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CAPN3P20807 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN3P20807 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN3P20807 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN3P20807 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN3P20807 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.07■□□□□ 0.48
CAPN3P20807 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.07■□□□□ 0.48
CAPN3P20807 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CAPN3P20807 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.07■□□□□ 0.48
CAPN3P20807 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.07■□□□□ 0.48
CAPN3P20807 LTB4R2-202ENST00000528054 3092 ntBASIC18.07■□□□□ 0.48
CAPN3P20807 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN3P20807 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN3P20807 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN3P20807 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.07■□□□□ 0.48
CAPN3P20807 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CAPN3P20807 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN3P20807 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CAPN3P20807 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN3P20807 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN3P20807 AIRN-201ENST00000601203 4374 ntBASIC18.07■□□□□ 0.48
CAPN3P20807 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CAPN3P20807 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN3P20807 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.06■□□□□ 0.48
CAPN3P20807 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN3P20807 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN3P20807 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.06■□□□□ 0.48
CAPN3P20807 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CAPN3P20807 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CAPN3P20807 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CAPN3P20807 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CAPN3P20807 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.06■□□□□ 0.48
CAPN3P20807 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms