Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VCLP18206 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCLP18206 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCLP18206 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCLP18206 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VCLP18206 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.89■□□□□ 0.61
VCLP18206 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VCLP18206 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.89■□□□□ 0.61
VCLP18206 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
VCLP18206 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.89■□□□□ 0.61
VCLP18206 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.89■□□□□ 0.61
VCLP18206 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
VCLP18206 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCLP18206 AC020916.1-201ENST00000587762 1774 ntBASIC18.88■□□□□ 0.61
VCLP18206 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCLP18206 AC141586.3-201ENST00000562166 1838 ntBASIC18.88■□□□□ 0.61
VCLP18206 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.88■□□□□ 0.61
VCLP18206 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
VCLP18206 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VCLP18206 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCLP18206 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCLP18206 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCLP18206 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCLP18206 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCLP18206 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCLP18206 MIR1238-201ENST00000408483 83 ntBASIC18.88■□□□□ 0.61
VCLP18206 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.88■□□□□ 0.61
VCLP18206 AC091390.4-202ENST00000476426 537 ntBASIC18.88■□□□□ 0.61
VCLP18206 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.88■□□□□ 0.61
VCLP18206 AC097488.1-201ENST00000507834 756 ntBASIC18.88■□□□□ 0.61
VCLP18206 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.88■□□□□ 0.61
VCLP18206 SLC25A1P4-201ENST00000567977 778 ntBASIC18.88■□□□□ 0.61
VCLP18206 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCLP18206 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.88■□□□□ 0.61
VCLP18206 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCLP18206 TEX21P-204ENST00000641479 1693 ntBASIC18.88■□□□□ 0.61
VCLP18206 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
VCLP18206 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VCLP18206 SDHAP1-207ENST00000440850 2000 ntBASIC18.88■□□□□ 0.61
VCLP18206 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCLP18206 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
VCLP18206 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VCLP18206 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.88■□□□□ 0.61
VCLP18206 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCLP18206 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
VCLP18206 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
VCLP18206 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCLP18206 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCLP18206 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
VCLP18206 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.87■□□□□ 0.61
VCLP18206 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCLP18206 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
VCLP18206 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
VCLP18206 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCLP18206 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.87■□□□□ 0.61
VCLP18206 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.87■□□□□ 0.61
VCLP18206 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.87■□□□□ 0.61
VCLP18206 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCLP18206 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCLP18206 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.87■□□□□ 0.61
VCLP18206 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCLP18206 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCLP18206 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCLP18206 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.87■□□□□ 0.61
VCLP18206 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.87■□□□□ 0.61
VCLP18206 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCLP18206 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCLP18206 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
VCLP18206 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCLP18206 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
VCLP18206 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VCLP18206 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.86■□□□□ 0.61
VCLP18206 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCLP18206 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCLP18206 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.86■□□□□ 0.61
VCLP18206 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
VCLP18206 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCLP18206 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCLP18206 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.86■□□□□ 0.61
VCLP18206 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCLP18206 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCLP18206 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCLP18206 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VCLP18206 CRYGFP-201ENST00000418459 633 ntBASIC18.86■□□□□ 0.61
VCLP18206 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.86■□□□□ 0.61
VCLP18206 TSPY15P-201ENST00000457163 923 ntBASIC18.86■□□□□ 0.61
VCLP18206 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.86■□□□□ 0.61
VCLP18206 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VCLP18206 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.86■□□□□ 0.61
VCLP18206 FITM1-202ENST00000559294 800 ntBASIC18.86■□□□□ 0.61
VCLP18206 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.86■□□□□ 0.61
VCLP18206 AP005242.2-201ENST00000580065 1175 ntBASIC18.86■□□□□ 0.61
VCLP18206 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
VCLP18206 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
VCLP18206 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCLP18206 PCDHB18P-201ENST00000524813 2368 ntBASIC18.86■□□□□ 0.61
VCLP18206 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.86■□□□□ 0.61
VCLP18206 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.86■□□□□ 0.61
VCLP18206 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
VCLP18206 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms