Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.43■□□□□ 0.86
SYN1P17600 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.43■□□□□ 0.86
SYN1P17600 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.43■□□□□ 0.86
SYN1P17600 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.43■□□□□ 0.86
SYN1P17600 MIR3687-2-201ENST00000577708 61 ntBASIC20.43■□□□□ 0.86
SYN1P17600 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.43■□□□□ 0.86
SYN1P17600 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SYN1P17600 MIR3687-1-201ENST00000614492 61 ntBASIC20.43■□□□□ 0.86
SYN1P17600 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.43■□□□□ 0.86
SYN1P17600 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SYN1P17600 AC134684.3-201ENST00000641758 218 ntBASIC20.43■□□□□ 0.86
SYN1P17600 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SYN1P17600 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SYN1P17600 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.43■□□□□ 0.86
SYN1P17600 AL691432.2-201ENST00000607222 2038 ntBASIC20.43■□□□□ 0.86
SYN1P17600 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.42■□□□□ 0.86
SYN1P17600 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SYN1P17600 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
SYN1P17600 YBX2P1-201ENST00000394192 760 ntBASIC20.42■□□□□ 0.86
SYN1P17600 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.42■□□□□ 0.86
SYN1P17600 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.42■□□□□ 0.86
SYN1P17600 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SYN1P17600 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SYN1P17600 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.42■□□□□ 0.86
SYN1P17600 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SYN1P17600 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.42■□□□□ 0.86
SYN1P17600 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SYN1P17600 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SYN1P17600 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SYN1P17600 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SYN1P17600 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYN1P17600 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.41■□□□□ 0.86
SYN1P17600 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
SYN1P17600 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYN1P17600 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.41■□□□□ 0.86
SYN1P17600 SDHAP1-207ENST00000440850 2000 ntBASIC20.41■□□□□ 0.86
SYN1P17600 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SYN1P17600 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SYN1P17600 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.41■□□□□ 0.86
SYN1P17600 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYN1P17600 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.41■□□□□ 0.86
SYN1P17600 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.41■□□□□ 0.86
SYN1P17600 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.41■□□□□ 0.86
SYN1P17600 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.41■□□□□ 0.86
SYN1P17600 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.41■□□□□ 0.86
SYN1P17600 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYN1P17600 AC145285.3-201ENST00000564603 959 ntBASIC20.41■□□□□ 0.86
SYN1P17600 MIR3197-201ENST00000582241 73 ntBASIC20.41■□□□□ 0.86
SYN1P17600 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
SYN1P17600 FAM197Y3-203ENST00000618346 717 ntBASIC20.41■□□□□ 0.86
SYN1P17600 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.41■□□□□ 0.86
SYN1P17600 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.41■□□□□ 0.86
SYN1P17600 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYN1P17600 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.41■□□□□ 0.86
SYN1P17600 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYN1P17600 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYN1P17600 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYN1P17600 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
SYN1P17600 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYN1P17600 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.41■□□□□ 0.86
SYN1P17600 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
SYN1P17600 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYN1P17600 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYN1P17600 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SYN1P17600 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SYN1P17600 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYN1P17600 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SYN1P17600 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SYN1P17600 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYN1P17600 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SYN1P17600 AL353692.3-201ENST00000407031 1396 ntBASIC20.4■□□□□ 0.86
SYN1P17600 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SYN1P17600 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.4■□□□□ 0.86
SYN1P17600 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SYN1P17600 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.4■□□□□ 0.86
SYN1P17600 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.4■□□□□ 0.86
SYN1P17600 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SYN1P17600 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.4■□□□□ 0.86
SYN1P17600 AC009237.14-201ENST00000609975 1594 ntBASIC20.4■□□□□ 0.86
SYN1P17600 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
SYN1P17600 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SYN1P17600 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SYN1P17600 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SYN1P17600 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SYN1P17600 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SYN1P17600 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.39■□□□□ 0.86
SYN1P17600 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.39■□□□□ 0.85
SYN1P17600 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SYN1P17600 KRT8P3-201ENST00000519669 1449 ntBASIC20.39■□□□□ 0.85
SYN1P17600 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SYN1P17600 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYN1P17600 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SYN1P17600 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.39■□□□□ 0.85
SYN1P17600 FGFR3P6-201ENST00000457012 610 ntBASIC20.39■□□□□ 0.85
SYN1P17600 IGHV3-22-201ENST00000520721 359 ntBASIC20.39■□□□□ 0.85
SYN1P17600 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.39■□□□□ 0.85
SYN1P17600 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SYN1P17600 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.39■□□□□ 0.85
SYN1P17600 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.39■□□□□ 0.85
SYN1P17600 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms