Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRKCAP17252 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRKCAP17252 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRKCAP17252 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRKCAP17252 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PRKCAP17252 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRKCAP17252 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRKCAP17252 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PRKCAP17252 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
PRKCAP17252 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PRKCAP17252 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PRKCAP17252 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.38■□□□□ 0.37
PRKCAP17252 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.38■□□□□ 0.37
PRKCAP17252 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRKCAP17252 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PRKCAP17252 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PRKCAP17252 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRKCAP17252 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRKCAP17252 AC004951.3-201ENST00000418645 1148 ntBASIC17.38■□□□□ 0.37
PRKCAP17252 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.38■□□□□ 0.37
PRKCAP17252 TSPY21P-201ENST00000433481 731 ntBASIC17.38■□□□□ 0.37
PRKCAP17252 B3GAT3P1-201ENST00000471720 806 ntBASIC17.38■□□□□ 0.37
PRKCAP17252 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.38■□□□□ 0.37
PRKCAP17252 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.38■□□□□ 0.37
PRKCAP17252 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PRKCAP17252 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.38■□□□□ 0.37
PRKCAP17252 MIR6786-201ENST00000616843 113 ntBASIC17.38■□□□□ 0.37
PRKCAP17252 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.38■□□□□ 0.37
PRKCAP17252 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRKCAP17252 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRKCAP17252 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.38■□□□□ 0.37
PRKCAP17252 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRKCAP17252 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PRKCAP17252 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PRKCAP17252 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRKCAP17252 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRKCAP17252 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRKCAP17252 AL139384.1-201ENST00000612143 3047 ntBASIC17.38■□□□□ 0.37
PRKCAP17252 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRKCAP17252 AC012313.1-201ENST00000593393 3059 ntBASIC17.38■□□□□ 0.37
PRKCAP17252 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
PRKCAP17252 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRKCAP17252 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRKCAP17252 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PRKCAP17252 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRKCAP17252 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PRKCAP17252 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.37■□□□□ 0.37
PRKCAP17252 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRKCAP17252 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.37■□□□□ 0.37
PRKCAP17252 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRKCAP17252 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRKCAP17252 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRKCAP17252 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRKCAP17252 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.37■□□□□ 0.37
PRKCAP17252 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
PRKCAP17252 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
PRKCAP17252 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.37■□□□□ 0.37
PRKCAP17252 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.37■□□□□ 0.37
PRKCAP17252 TSPY23P-201ENST00000440136 739 ntBASIC17.37■□□□□ 0.37
PRKCAP17252 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.37■□□□□ 0.37
PRKCAP17252 AC011506.1-201ENST00000474329 610 ntBASIC17.37■□□□□ 0.37
PRKCAP17252 AC091390.4-202ENST00000476426 537 ntBASIC17.37■□□□□ 0.37
PRKCAP17252 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRKCAP17252 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.37■□□□□ 0.37
PRKCAP17252 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.37■□□□□ 0.37
PRKCAP17252 AC011298.2-201ENST00000617989 482 ntBASIC17.37■□□□□ 0.37
PRKCAP17252 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRKCAP17252 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.37■□□□□ 0.37
PRKCAP17252 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PRKCAP17252 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRKCAP17252 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRKCAP17252 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.37■□□□□ 0.37
PRKCAP17252 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRKCAP17252 FSCN1P1-201ENST00000568912 1481 ntBASIC17.37■□□□□ 0.37
PRKCAP17252 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRKCAP17252 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRKCAP17252 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRKCAP17252 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRKCAP17252 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
PRKCAP17252 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.36■□□□□ 0.37
PRKCAP17252 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PRKCAP17252 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRKCAP17252 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.36■□□□□ 0.37
PRKCAP17252 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
PRKCAP17252 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.36■□□□□ 0.37
PRKCAP17252 MESTP1-201ENST00000404287 994 ntBASIC17.36■□□□□ 0.37
PRKCAP17252 AC116562.2-201ENST00000507042 360 ntBASIC17.36■□□□□ 0.37
PRKCAP17252 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.36■□□□□ 0.37
PRKCAP17252 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.36■□□□□ 0.37
PRKCAP17252 AC026471.5-201ENST00000615068 467 ntBASIC17.36■□□□□ 0.37
PRKCAP17252 AC130371.2-201ENST00000619443 611 ntBASIC17.36■□□□□ 0.37
PRKCAP17252 AC066615.1-201ENST00000640911 628 ntBASIC17.36■□□□□ 0.37
PRKCAP17252 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRKCAP17252 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRKCAP17252 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.36■□□□□ 0.37
PRKCAP17252 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRKCAP17252 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRKCAP17252 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRKCAP17252 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRKCAP17252 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms