Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
COL11A1P12107 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.36■■□□□ 1.01
COL11A1P12107 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL11A1P12107 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
COL11A1P12107 UNC93B7-201ENST00000509439 705 ntBASIC21.36■■□□□ 1.01
COL11A1P12107 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
COL11A1P12107 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC21.36■■□□□ 1.01
COL11A1P12107 AL031008.1-201ENST00000619963 541 ntBASIC21.36■■□□□ 1.01
COL11A1P12107 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.36■■□□□ 1.01
COL11A1P12107 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.36■■□□□ 1.01
COL11A1P12107 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL11A1P12107 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
COL11A1P12107 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.36■■□□□ 1.01
COL11A1P12107 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL11A1P12107 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL11A1P12107 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.36■■□□□ 1.01
COL11A1P12107 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.36■■□□□ 1.01
COL11A1P12107 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.36■■□□□ 1.01
COL11A1P12107 KRT8P50-201ENST00000562022 1438 ntBASIC21.36■■□□□ 1.01
COL11A1P12107 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL11A1P12107 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.36■■□□□ 1.01
COL11A1P12107 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL11A1P12107 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL11A1P12107 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.36■■□□□ 1.01
COL11A1P12107 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL11A1P12107 KRT18P41-201ENST00000518924 1277 ntBASIC21.36■■□□□ 1.01
COL11A1P12107 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.36■■□□□ 1.01
COL11A1P12107 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
COL11A1P12107 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL11A1P12107 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.36■■□□□ 1.01
COL11A1P12107 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL11A1P12107 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
COL11A1P12107 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.35■■□□□ 1.01
COL11A1P12107 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL11A1P12107 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL11A1P12107 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL11A1P12107 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC21.35■■□□□ 1.01
COL11A1P12107 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL11A1P12107 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
COL11A1P12107 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL11A1P12107 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
COL11A1P12107 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
COL11A1P12107 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
COL11A1P12107 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL11A1P12107 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
COL11A1P12107 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
COL11A1P12107 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.35■■□□□ 1.01
COL11A1P12107 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.35■■□□□ 1.01
COL11A1P12107 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.35■■□□□ 1.01
COL11A1P12107 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.35■■□□□ 1.01
COL11A1P12107 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.34■■□□□ 1.01
COL11A1P12107 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL11A1P12107 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
COL11A1P12107 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL11A1P12107 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL11A1P12107 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
COL11A1P12107 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.34■■□□□ 1.01
COL11A1P12107 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL11A1P12107 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL11A1P12107 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL11A1P12107 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL11A1P12107 AC233702.3-201ENST00000578656 1387 ntBASIC21.34■■□□□ 1.01
COL11A1P12107 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL11A1P12107 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL11A1P12107 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL11A1P12107 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
COL11A1P12107 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL11A1P12107 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.34■■□□□ 1.01
COL11A1P12107 AC026396.1-201ENST00000419388 421 ntBASIC21.34■■□□□ 1.01
COL11A1P12107 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.34■■□□□ 1.01
COL11A1P12107 AC011498.5-201ENST00000592027 486 ntBASIC21.34■■□□□ 1.01
COL11A1P12107 AL390719.2-201ENST00000606993 987 ntBASIC21.34■■□□□ 1.01
COL11A1P12107 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
COL11A1P12107 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
COL11A1P12107 Z83836.1-201ENST00000624605 1642 ntBASIC21.33■■□□□ 1.01
COL11A1P12107 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
COL11A1P12107 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.33■■□□□ 1.01
COL11A1P12107 KRT18P1-202ENST00000452408 1331 ntBASIC21.33■■□□□ 1.01
COL11A1P12107 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
COL11A1P12107 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.33■■□□□ 1.01
COL11A1P12107 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.33■■□□□ 1.01
COL11A1P12107 TSPY12P-201ENST00000421279 868 ntBASIC21.33■■□□□ 1.01
COL11A1P12107 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.33■■□□□ 1.01
COL11A1P12107 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
COL11A1P12107 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
COL11A1P12107 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
COL11A1P12107 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.33■■□□□ 1
COL11A1P12107 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.32■■□□□ 1
COL11A1P12107 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL11A1P12107 LINC00265-3P-201ENST00000447588 903 ntBASIC21.32■■□□□ 1
COL11A1P12107 BET1L-206ENST00000486280 665 ntTSL 3 BASIC21.32■■□□□ 1
COL11A1P12107 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.32■■□□□ 1
COL11A1P12107 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
COL11A1P12107 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.32■■□□□ 1
COL11A1P12107 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.32■■□□□ 1
COL11A1P12107 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
COL11A1P12107 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL11A1P12107 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL11A1P12107 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
COL11A1P12107 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms