Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBL4AP11441 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBL4AP11441 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
UBL4AP11441 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBL4AP11441 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBL4AP11441 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.38■□□□□ 0.37
UBL4AP11441 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBL4AP11441 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBL4AP11441 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBL4AP11441 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBL4AP11441 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBL4AP11441 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBL4AP11441 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBL4AP11441 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBL4AP11441 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBL4AP11441 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.38■□□□□ 0.37
UBL4AP11441 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
UBL4AP11441 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.38■□□□□ 0.37
UBL4AP11441 DGCR10-201ENST00000609839 495 ntBASIC17.38■□□□□ 0.37
UBL4AP11441 AC026471.5-201ENST00000615068 467 ntBASIC17.38■□□□□ 0.37
UBL4AP11441 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.38■□□□□ 0.37
UBL4AP11441 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBL4AP11441 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBL4AP11441 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
UBL4AP11441 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBL4AP11441 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBL4AP11441 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBL4AP11441 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.37■□□□□ 0.37
UBL4AP11441 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBL4AP11441 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
UBL4AP11441 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBL4AP11441 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBL4AP11441 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.37■□□□□ 0.37
UBL4AP11441 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.37■□□□□ 0.37
UBL4AP11441 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.37■□□□□ 0.37
UBL4AP11441 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.37■□□□□ 0.37
UBL4AP11441 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.37■□□□□ 0.37
UBL4AP11441 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBL4AP11441 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBL4AP11441 AC116562.2-201ENST00000507042 360 ntBASIC17.37■□□□□ 0.37
UBL4AP11441 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.37■□□□□ 0.37
UBL4AP11441 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.37■□□□□ 0.37
UBL4AP11441 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
UBL4AP11441 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.37■□□□□ 0.37
UBL4AP11441 CKBP1-201ENST00000565489 1086 ntBASIC17.37■□□□□ 0.37
UBL4AP11441 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.37■□□□□ 0.37
UBL4AP11441 AP000692.2-201ENST00000608391 879 ntBASIC17.37■□□□□ 0.37
UBL4AP11441 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.37■□□□□ 0.37
UBL4AP11441 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
UBL4AP11441 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
UBL4AP11441 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
UBL4AP11441 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBL4AP11441 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBL4AP11441 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.37■□□□□ 0.37
UBL4AP11441 HCG11-201ENST00000411553 5696 ntBASIC17.36■□□□□ 0.37
UBL4AP11441 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBL4AP11441 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBL4AP11441 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBL4AP11441 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBL4AP11441 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBL4AP11441 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBL4AP11441 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBL4AP11441 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
UBL4AP11441 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.36■□□□□ 0.37
UBL4AP11441 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.36■□□□□ 0.37
UBL4AP11441 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBL4AP11441 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBL4AP11441 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBL4AP11441 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBL4AP11441 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBL4AP11441 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.36■□□□□ 0.37
UBL4AP11441 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.36■□□□□ 0.37
UBL4AP11441 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBL4AP11441 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBL4AP11441 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBL4AP11441 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBL4AP11441 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBL4AP11441 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.36■□□□□ 0.37
UBL4AP11441 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBL4AP11441 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
UBL4AP11441 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
UBL4AP11441 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBL4AP11441 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBL4AP11441 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBL4AP11441 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.35■□□□□ 0.37
UBL4AP11441 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBL4AP11441 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBL4AP11441 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
UBL4AP11441 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBL4AP11441 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
UBL4AP11441 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
UBL4AP11441 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.35■□□□□ 0.37
UBL4AP11441 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
UBL4AP11441 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBL4AP11441 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.35■□□□□ 0.37
UBL4AP11441 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBL4AP11441 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBL4AP11441 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
UBL4AP11441 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.35■□□□□ 0.37
UBL4AP11441 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms