Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 MTMR9LP-203ENST00000426597 1545 ntBASIC17.06■□□□□ 0.32
FREM3P0C091 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FREM3P0C091 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FREM3P0C091 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FREM3P0C091 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.05■□□□□ 0.32
FREM3P0C091 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FREM3P0C091 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FREM3P0C091 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.05■□□□□ 0.32
FREM3P0C091 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.05■□□□□ 0.32
FREM3P0C091 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
FREM3P0C091 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
FREM3P0C091 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
FREM3P0C091 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.05■□□□□ 0.32
FREM3P0C091 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.05■□□□□ 0.32
FREM3P0C091 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
FREM3P0C091 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.05■□□□□ 0.32
FREM3P0C091 AC112907.2-201ENST00000448639 330 ntBASIC17.05■□□□□ 0.32
FREM3P0C091 COX11P1-201ENST00000489116 835 ntBASIC17.05■□□□□ 0.32
FREM3P0C091 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
FREM3P0C091 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.05■□□□□ 0.32
FREM3P0C091 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FREM3P0C091 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
FREM3P0C091 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.05■□□□□ 0.32
FREM3P0C091 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
FREM3P0C091 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FREM3P0C091 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.05■□□□□ 0.32
FREM3P0C091 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FREM3P0C091 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FREM3P0C091 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.05■□□□□ 0.32
FREM3P0C091 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FREM3P0C091 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FREM3P0C091 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FREM3P0C091 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.05■□□□□ 0.32
FREM3P0C091 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
FREM3P0C091 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FREM3P0C091 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FREM3P0C091 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FREM3P0C091 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FREM3P0C091 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
FREM3P0C091 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.05■□□□□ 0.32
FREM3P0C091 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.05■□□□□ 0.32
FREM3P0C091 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.05■□□□□ 0.32
FREM3P0C091 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FREM3P0C091 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FREM3P0C091 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
FREM3P0C091 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FREM3P0C091 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.04■□□□□ 0.32
FREM3P0C091 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FREM3P0C091 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.04■□□□□ 0.32
FREM3P0C091 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
FREM3P0C091 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FREM3P0C091 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FREM3P0C091 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FREM3P0C091 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FREM3P0C091 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FREM3P0C091 AL031133.1-201ENST00000406807 723 ntBASIC17.04■□□□□ 0.32
FREM3P0C091 FAM8A6P-201ENST00000407496 1135 ntBASIC17.04■□□□□ 0.32
FREM3P0C091 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.04■□□□□ 0.32
FREM3P0C091 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.04■□□□□ 0.32
FREM3P0C091 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.04■□□□□ 0.32
FREM3P0C091 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.04■□□□□ 0.32
FREM3P0C091 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.04■□□□□ 0.32
FREM3P0C091 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FREM3P0C091 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
FREM3P0C091 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.04■□□□□ 0.32
FREM3P0C091 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
FREM3P0C091 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FREM3P0C091 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FREM3P0C091 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.04■□□□□ 0.32
FREM3P0C091 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.03■□□□□ 0.32
FREM3P0C091 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FREM3P0C091 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
FREM3P0C091 HBZP1-201ENST00000354915 429 ntBASIC17.03■□□□□ 0.32
FREM3P0C091 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
FREM3P0C091 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
FREM3P0C091 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.03■□□□□ 0.32
FREM3P0C091 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.03■□□□□ 0.32
FREM3P0C091 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FREM3P0C091 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FREM3P0C091 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
FREM3P0C091 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.03■□□□□ 0.32
FREM3P0C091 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FREM3P0C091 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FREM3P0C091 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.03■□□□□ 0.32
FREM3P0C091 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FREM3P0C091 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FREM3P0C091 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
FREM3P0C091 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
FREM3P0C091 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FREM3P0C091 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FREM3P0C091 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FREM3P0C091 STARP1-201ENST00000397973 869 ntBASIC17.03■□□□□ 0.32
FREM3P0C091 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FREM3P0C091 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.03■□□□□ 0.32
FREM3P0C091 LINC01238-205ENST00000567549 1107 ntBASIC17.03■□□□□ 0.32
FREM3P0C091 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
FREM3P0C091 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FREM3P0C091 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
FREM3P0C091 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FREM3P0C091 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms