Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD48P09326 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CD48P09326 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD48P09326 RCC2P3-201ENST00000418112 1537 ntBASIC19.49■□□□□ 0.71
CD48P09326 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.49■□□□□ 0.71
CD48P09326 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD48P09326 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CD48P09326 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD48P09326 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.49■□□□□ 0.71
CD48P09326 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD48P09326 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CD48P09326 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CD48P09326 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
CD48P09326 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CD48P09326 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD48P09326 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CD48P09326 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD48P09326 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD48P09326 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD48P09326 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CD48P09326 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.48■□□□□ 0.71
CD48P09326 AL355355.2-201ENST00000442321 338 ntBASIC19.48■□□□□ 0.71
CD48P09326 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CD48P09326 AC097488.1-201ENST00000507834 756 ntBASIC19.48■□□□□ 0.71
CD48P09326 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.48■□□□□ 0.71
CD48P09326 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.48■□□□□ 0.71
CD48P09326 AP003071.4-201ENST00000562276 1284 ntBASIC19.48■□□□□ 0.71
CD48P09326 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.48■□□□□ 0.71
CD48P09326 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.48■□□□□ 0.71
CD48P09326 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.48■□□□□ 0.71
CD48P09326 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.48■□□□□ 0.71
CD48P09326 DGCR10-201ENST00000609839 495 ntBASIC19.48■□□□□ 0.71
CD48P09326 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.48■□□□□ 0.71
CD48P09326 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.48■□□□□ 0.71
CD48P09326 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD48P09326 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.48■□□□□ 0.71
CD48P09326 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
CD48P09326 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD48P09326 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CD48P09326 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CD48P09326 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD48P09326 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.48■□□□□ 0.71
CD48P09326 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
CD48P09326 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.47■□□□□ 0.71
CD48P09326 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CD48P09326 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD48P09326 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD48P09326 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.47■□□□□ 0.71
CD48P09326 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.47■□□□□ 0.71
CD48P09326 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD48P09326 AL357033.4-201ENST00000617703 1807 ntBASIC19.47■□□□□ 0.71
CD48P09326 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.47■□□□□ 0.71
CD48P09326 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CD48P09326 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.47■□□□□ 0.71
CD48P09326 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.47■□□□□ 0.71
CD48P09326 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CD48P09326 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.47■□□□□ 0.71
CD48P09326 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CD48P09326 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.47■□□□□ 0.71
CD48P09326 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.47■□□□□ 0.71
CD48P09326 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.47■□□□□ 0.71
CD48P09326 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD48P09326 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CD48P09326 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CD48P09326 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
CD48P09326 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD48P09326 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CD48P09326 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.46■□□□□ 0.71
CD48P09326 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CD48P09326 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CD48P09326 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD48P09326 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.46■□□□□ 0.71
CD48P09326 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CD48P09326 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.46■□□□□ 0.71
CD48P09326 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CD48P09326 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.46■□□□□ 0.71
CD48P09326 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD48P09326 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD48P09326 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CD48P09326 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CD48P09326 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.46■□□□□ 0.71
CD48P09326 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CD48P09326 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CD48P09326 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CD48P09326 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.46■□□□□ 0.71
CD48P09326 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.46■□□□□ 0.71
CD48P09326 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD48P09326 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD48P09326 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD48P09326 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD48P09326 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.46■□□□□ 0.71
CD48P09326 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CD48P09326 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD48P09326 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD48P09326 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.45■□□□□ 0.7
CD48P09326 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD48P09326 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD48P09326 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.45■□□□□ 0.7
CD48P09326 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.45■□□□□ 0.7
CD48P09326 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms