Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TIMP1P01033 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.3■□□□□ 0.84
TIMP1P01033 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
TIMP1P01033 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
TIMP1P01033 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TIMP1P01033 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TIMP1P01033 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TIMP1P01033 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TIMP1P01033 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TIMP1P01033 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.29■□□□□ 0.84
TIMP1P01033 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TIMP1P01033 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TIMP1P01033 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TIMP1P01033 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TIMP1P01033 MIR940-201ENST00000401276 94 ntBASIC20.29■□□□□ 0.84
TIMP1P01033 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.29■□□□□ 0.84
TIMP1P01033 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.29■□□□□ 0.84
TIMP1P01033 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.29■□□□□ 0.84
TIMP1P01033 AC139887.3-201ENST00000568585 713 ntBASIC20.29■□□□□ 0.84
TIMP1P01033 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.29■□□□□ 0.84
TIMP1P01033 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.29■□□□□ 0.84
TIMP1P01033 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
TIMP1P01033 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TIMP1P01033 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TIMP1P01033 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TIMP1P01033 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TIMP1P01033 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TIMP1P01033 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TIMP1P01033 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TIMP1P01033 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TIMP1P01033 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TIMP1P01033 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TIMP1P01033 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TIMP1P01033 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TIMP1P01033 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
TIMP1P01033 AC018712.1-201ENST00000455767 687 ntBASIC20.28■□□□□ 0.84
TIMP1P01033 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.28■□□□□ 0.84
TIMP1P01033 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.28■□□□□ 0.84
TIMP1P01033 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.28■□□□□ 0.84
TIMP1P01033 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.28■□□□□ 0.84
TIMP1P01033 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.28■□□□□ 0.84
TIMP1P01033 AC008608.2-201ENST00000606089 416 ntBASIC20.28■□□□□ 0.84
TIMP1P01033 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
TIMP1P01033 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TIMP1P01033 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TIMP1P01033 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TIMP1P01033 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.28■□□□□ 0.84
TIMP1P01033 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TIMP1P01033 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TIMP1P01033 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.28■□□□□ 0.84
TIMP1P01033 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TIMP1P01033 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TIMP1P01033 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.27■□□□□ 0.84
TIMP1P01033 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TIMP1P01033 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TIMP1P01033 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TIMP1P01033 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TIMP1P01033 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TIMP1P01033 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TIMP1P01033 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TIMP1P01033 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TIMP1P01033 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.27■□□□□ 0.84
TIMP1P01033 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TIMP1P01033 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TIMP1P01033 ZNF259P1-201ENST00000407656 1365 ntBASIC20.27■□□□□ 0.84
TIMP1P01033 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TIMP1P01033 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TIMP1P01033 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.27■□□□□ 0.84
TIMP1P01033 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TIMP1P01033 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TIMP1P01033 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TIMP1P01033 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.27■□□□□ 0.84
TIMP1P01033 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.27■□□□□ 0.84
TIMP1P01033 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.27■□□□□ 0.84
TIMP1P01033 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.27■□□□□ 0.84
TIMP1P01033 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.27■□□□□ 0.84
TIMP1P01033 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
TIMP1P01033 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.27■□□□□ 0.84
TIMP1P01033 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TIMP1P01033 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.27■□□□□ 0.84
TIMP1P01033 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.27■□□□□ 0.83
TIMP1P01033 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.27■□□□□ 0.83
TIMP1P01033 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.27■□□□□ 0.83
TIMP1P01033 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TIMP1P01033 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TIMP1P01033 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TIMP1P01033 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TIMP1P01033 AC099778.1-201ENST00000568593 1911 ntBASIC20.26■□□□□ 0.83
TIMP1P01033 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TIMP1P01033 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TIMP1P01033 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TIMP1P01033 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TIMP1P01033 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TIMP1P01033 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.26■□□□□ 0.83
TIMP1P01033 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.26■□□□□ 0.83
TIMP1P01033 AC132008.2-207ENST00000454517 770 ntBASIC20.26■□□□□ 0.83
TIMP1P01033 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TIMP1P01033 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.26■□□□□ 0.83
TIMP1P01033 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.26■□□□□ 0.83
TIMP1P01033 AL049840.3-201ENST00000602669 611 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms